Job Description A1L020 Confidence 31.94% Date Tue Apr 3 15:04:20 BST 2012 Rank 203 Aligned Residues 70 % Identity 21% Template d2fy8a2 SCOP info TrkA C-terminal domain-like TrkA C-terminal domain-like TrkA C-terminal domain-like Resolution 2.79

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.											.	.	.	170	.	.					.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Query Sequence		K	E	A	E	L	R	L	K	G	S	S	N	T	T	E	C	V	P	V	P	T	S	E	H	V	A	E	I	V	G	R	Q	G	C	K	I	K	A	L	R	A	K	T	N	T	Y	I	.	.	.	.	.	.	.	.	.	.	K	T	P	V	R	G	.	.	.	.	E	E	P	V	F	M	V	T	G	R	R	E	D
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Alig confidence																						.	.			.													.										.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template Conservation																						.	.			.													.
Template Sequence		F	V	Q	D	V	L	A	E	E	S	T	R	R	M	V	E	V	P	I	P	.	.	E	G	.	S	K	L	E	G	V	S	V	L	D	A	D	.	I	H	D	V	T	G	V	I	I	I	G	V	G	R	G	D	E	L	I	I	D	P	P	R	D	Y	S	F	R	A	G	D	I	I	L	G	I	G	K	P	E	E
Template Known Secondary structure								T	S		S	S										.	.	S	S	.	S	T	T	T	T		B						.						S									T	T					S			T	T		B			T	T
Template Predicted Secondary structure																						.	.			.													.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.		.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		186	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	T	A	R	R	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	R	L	K	N	Y	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions