 |
| Job Description | A1L020 | | Confidence | 98.27% | Date | Tue Apr 3 15:04:20 BST 2012 |
| Rank | 78 | Aligned Residues | 48 |
| % Identity | 23% | Template | d1g25a_ |
| SCOP info | RING/U-box
| RING/U-box
| RING finger domain, C3HC4
|
| Resolution | UNK |
|
|   |   |
465 | . | . | . | . | 470 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|  |  |  |
|
|
| . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
G | G | R | D | C | M | V | C | F | E | S | . |
. |
. |
. |
. |
E | V | T | A | A | L | V | P | C | G | H | N | L | F | C | M | E | C | A | V | R | I | C | E | R | T | D | P | E | C | P | V | C | H | I | T | A | T |
| Query Conservation |   |
  |   |
|   |
|   |
|
|   |
|   | . | . | . | . | . |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |   |   |
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
| . |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |
| Template Sequence |   |
D | D | Q | G | C | P | R | C | K | T | T | K | Y | R | N | P | S | L | K | L | M | V | N | V | C | G | H | . |
T | L | C | E | S | C | V | D | L | L | F | V | R | G | A | G | N | C | P | E | C | G | T | P | L | R |
| Template Known Secondary structure |   |
| T | T |
|
| S | T | T | T | T |  |  |  |  |
| S | S |
|
|  |  |  |
| T | T |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S |
| T | T | T |
|
|
|
| S |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|