Job Description A1L020 Confidence 99.96% Date Tue Apr 3 15:04:20 BST 2012 Rank 1 Aligned Residues 163 % Identity 18% Template c3n89B_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:defective in germ line development protein 3, isoform a; PDBTitle: kh domains Resolution 2.79 Å

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.																							.	.																								.
Query SS confidence																																.	.																							.	.																								.
Query Sequence		E	L	R	L	K	G	S	S	N	T	T	E	C	V	P	V	P	T	S	E	H	V	A	E	I	V	G	R	Q	G	.	.	C	K	I	K	A	L	R	A	K	T	N	T	Y	I	K	T	P	V	R	G	E	E	.	.	P	V	F	M	V	T	G	R	R	E	D	V	A	T	A	R	R	E	I	I	S	A	A	.
Query Conservation																																.	.																							.	.																								.
Alig confidence																							.									.	.																							.	.																								.
Template Conservation																							.
Template Sequence		P	M	I	E	I	N	P	T	R	V	T	L	N	M	E	F	E	S	Q	Y	Y	.	S	L	M	T	S	D	N	G	D	H	E	N	V	A	S	I	M	A	E	T	N	T	L	I	Q	L	P	T	T	P	D	P	F	A	Q	Q	V	T	I	T	G	Y	F	G	D	V	D	R	A	R	M	L	M	R	R	N	C	H
Template Known Secondary structure								T	T										G	G	G		.				T			S			T	T	S							T	T	T											T	T	T	T
Template Predicted Secondary structure																							.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
																198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.																											.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	F	S	M	I	R	A	S	R	N	K	S	G	A	A	F	G	V	A	P	A	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	V	T	I	R	V	R	V	P	Y	R	V	V	G	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	T	V	F	M	A	L	S	K	M	K	M	P	L	H	E	L	Q	A	H	V	R	Q	N	P	I	Q	N	V	E	M	S	F	V	D	T	T	Y	L	R	I	T	A	R	E	K	N	Q	H	E	L	I	E	A	A	K	R	L	N	E	I	L	F	E	N	N	F	T	L	H	F	T	L	S	T	Y	Y	V	D	Q
Template Known Secondary structure									S	S			S											T	S		B	T	T	B																G	G	G																												G	G	G
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		238	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		V	V	G	P	K	.	.	G	A	T	I	K	R	I	Q	Q	Q	T	N	T	Y	I	I	T	P	S	R	D	R	D	P	V	F	E	I	T	G	A	P	G	N	V	E	R	A	R	E	E	I	E	T	H	I
Query Conservation							.	.
Alig confidence							.	.																			.	.
Template Conservation																											.	.
Template Sequence		V	L	G	S	S	S	T	A	Q	L	M	P	V	I	E	R	E	T	T	T	I	I	S	Y	P	.	.	G	N	I	Y	E	I	K	V	V	G	N	I	D	N	V	L	K	A	R	R	Y	I	M	D	L	L
Template Known Secondary structure			T			T	T	S												T							.	.											S														T	S
Template Predicted Secondary structure																											.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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