 |
| Job Description | A1L020 | | Confidence | 98.40% | Date | Tue Apr 3 15:04:20 BST 2012 |
| Rank | 69 | Aligned Residues | 46 |
| % Identity | 30% | Template | c3lrqB_ |
| PDB info |
PDB header:ligase | Chain: B: PDB Molecule:e3 ubiquitin-protein ligase trim37; |
PDBTitle: crystal structure of the u-box domain of human ubiquitin-2 protein ligase (e3), northeast structural genomics3 consortium target hr4604d.
|
| Resolution | 2.29 Å |
|
|   |   |
468 | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | |
. | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . |
| Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
D | C | M | V | C | F | E | S | E | V | T | A | A | L | V | P | . |
C | G | H | N | L | F | C | M | E | C | A | V | R | I | C | E | R | T | D | P | E | C | P | V | C | H | I | T | A | T | Q |
| Query Conservation |   |
  |
|   |
|
|   |
|   |   |
|   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |   |   |
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
| . |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |
| Template Sequence |   |
R | C | F | I | C | X | E | K | L | R | D | A | R | L | C | P | H | C | S | K | . |
L | C | C | F | S | C | I | R | R | W | L | T | E | Q | R | A | Q | C | P | H | C | R | A | P | L | Q | L |
| Template Known Secondary structure |   |
B |
| T | T | T |
| S | B |
| S | S |  |  |  |
| T | T | T |
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | B |
| T | T | T |
|
| B |
|
| G |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|