Job Description A1L020 Confidence 95.89% Date Tue Apr 3 15:04:20 BST 2012 Rank 120 Aligned Residues 107 % Identity 13% Template c3gkuB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:probable rna-binding protein; PDBTitle: crystal structure of a probable rna-binding protein from clostridium2 symbiosum atcc 14940 Resolution 2.95 Å

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	M	V	T	G	R	R	E	D	V	A	T	A	R	R	E	I	I	S	A	A	E	H	F	S	M	I	R	A	S	R	N	K	S	G	A	A	F	G	V	A	P	A	L	P	G	Q	V	T	I	R	V	R	V	P	Y	R	V	V	G	L	V	V	G	P	K	G	A	T	I	K	R	I	Q	Q	Q	T	N	T
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.
Template Sequence		I	I	R	A	K	R	K	E	T	L	Q	D	K	A	I	E	F	L	E	Q	V	F	D	A	X	N	X	.	.	.	.	.	.	.	.	.	A	V	D	I	S	V	E	Y	N	E	T	E	K	E	X	N	V	N	L	K	G	D	D	X	G	I	L	I	G	K	R	G	Q	T	L	D	S	L	Q	Y	L	V	S	L
Template Known Secondary structure																										T	T		.	.	.	.	.	.	.	.	.										T	T	T	T								S	G	G	G	G	G	G	T	T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.										.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		256	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		Y	I	I	T	P	S	R	D	R	D	P	V	.	F	E	I	T	G	A	P	G	N	V	E	R	A	R	E	E	I	E	T	H	I	A	V	R
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		V	V	N	K	S	S	S	D	Y	I	R	V	K	L	D	T	E	N	Y	R	E	R	R	K	E	T	L	E	T	L	A	K	N	I	A	Y	K
Template Known Secondary structure						T		S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions