Job Description A1L020 Confidence 95.34% Date Tue Apr 3 15:04:20 BST 2012 Rank 122 Aligned Residues 157 % Identity 20% Template c3af5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein ph1404; PDBTitle: the crystal structure of an archaeal cpsf subunit, ph1404 from2 pyrococcus horikoshii Resolution 2.60 Å

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	K	L	C	A	L	Y	K	E	A	E	L	R	L	K	G	S	S	N	T	T	E	C	V	P	V	P	T	S	E	H	V	A	E	I	V	G	R	Q	G	C	K	I	K	A	L	R	A	K	T	N	T	Y	I	K	T	P	V	R	G	E	E	P	V	F	M	V	T	G	R	R	E	D	V	A	T	A	R	R
Query Conservation
Alig confidence																														.	.																												.	.							.	.	.	.	.	.
Template Conservation																														.	.																												.	.							.	.	.	.	.	.
Template Sequence		Q	I	L	R	D	I	R	A	V	V	N	Q	M	V	P	K	E	A	K	I	T	E	I	E	F	E	G	P	.	.	E	L	V	I	Y	V	K	N	P	E	G	E	L	I	K	D	L	A	K	V	L	K	K	R	I	S	V	.	.	R	P	D	P	E	V	.	.	.	.	.	.	L	L	P	P	E	E	A	E	K
Template Known Secondary structure												T	T	T	S		T	T	S									S	S	.	.	S						S	S					S									T	S					.	.				G	G	G	.	.	.	.	.	.	S
Template Predicted Secondary structure																														.	.																												.	.							.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.							.	.	.	.	.	.	80	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.				260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.
Query SS confidence																																																																						.	.	.
Query Sequence		E	I	I	S	A	A	E	H	F	S	M	I	R	A	S	R	N	K	S	G	A	A	F	G	V	A	P	A	L	P	G	Q	V	T	I	R	V	R	V	P	Y	R	V	V	G	L	V	V	G	P	K	G	A	T	I	K	R	I	Q	Q	Q	T	N	T	Y	I	I	T	.	.	.	P	S	R	D	R	D	P	V	F
Query Conservation																																																																						.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	F	E	I	V	P	K	E	A	E	I	T	N	I	A	F	D	P	S	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	L	I	E	A	K	K	P	G	L	V	I	G	K	N	G	E	T	L	R	L	I	T	Q	K	V	K	W	A	P	K	V	V	R	T	P	P	L	Q	S	Q	T	I	Y
Template Known Secondary structure							S		G	G	G									T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S	T	T	T	T	S		T	T	S												S									S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.														110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	T	G	A	P	G	N	V	E	R	A	R	E	E	I	E	T	H	I	A	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	R	Q	I	L	Q	T	E	S	K	D	R	R	K	F	L	R	Q	V	G	R	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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