Job Description A1L020 Confidence 94.40% Date Tue Apr 3 15:04:20 BST 2012 Rank 123 Aligned Residues 121 % Identity 22% Template c2ycbA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cleavage and polyadenylation specificity factor; PDBTitle: structure of the archaeal beta-casp protein with n-terminal2 kh domains from methanothermobacter thermautotrophicus Resolution 3.10 Å

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		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	G	C	K	I	K	A	L	R	A	K	T	N	T	Y	I	K	T	P	V	R	G	E	E	P	V	F	M	V	T	G	R	R	E	D	V	A	T	A	R	R	E	I	I	S	A	A	E	H	F	S	M	I	R	A	S	R	N	K	S	G	A	A	F	G	V	A	P	A	L	P	G	Q	V	T	I	R	V	R
Query Conservation
Alig confidence																					.	.							.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.							.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	N	G	N	L	I	R	D	I	A	K	D	I	R	K	R	I	I	I	.	.	R	S	D	R	S	V	.	.	.	.	.	.	L	M	D	P	E	K	A	I	R	K	I	H	E	I	V	P	E	E	A	K	I	T	N	I	S	F	D	D	V	T	C	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	I
Template Known Secondary structure		S		T											T	S					.	.				G	G	G	.	.	.	.	.	.														T	S		S	T	T									T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.							.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.							70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100														.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.				260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		V	P	Y	R	V	V	G	L	V	V	G	P	K	G	A	T	I	K	R	I	Q	Q	Q	T	N	T	Y	I	I	T	.	.	.	P	S	R	D	R	D	P	V	F	E	I	T	G	A	P	G	N	V	E	R	A	R	E	E	I	E	T	H	I	A	V	R
Query Conservation																																.	.	.
Alig confidence																																.	.	.
Template Conservation
Template Sequence		I	E	A	R	K	P	G	L	V	I	G	K	Y	G	S	T	S	R	E	I	V	K	N	T	G	W	A	P	K	I	L	R	T	P	P	I	S	S	E	I	I	E	R	I	R	R	T	L	R	K	N	S	K	E	R	K	K	I	L	Q	Q	L	G	N	R
Template Known Secondary structure					S		T						T	T	S																					S	S															T
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions