Job Description A1L020 Confidence 59.39% Date Tue Apr 3 15:04:20 BST 2012 Rank 160 Aligned Residues 67 % Identity 12% Template c2xznC_ PDB info PDB header:ribosome Chain: C: PDB Molecule:kh domain containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		I	R	V	R	V	P	Y	R	V	V	G	L	V	V	G	P	K	G	A	T	I	K	R	I	Q	Q	Q	T	N	T	Y	I	I	T	P	S	R	D	R	D	.	P	V	F	E	I	T	G	A	P	G	N	V	E	R	A	R	E	E	I	E	T	H	I	A	V	R	T
Query Conservation																																										.
Alig confidence																																										.
Template Conservation
Template Sequence		T	E	I	R	I	K	A	T	K	P	Q	Q	V	I	G	V	E	G	K	K	H	K	E	L	T	Q	F	L	Q	K	R	F	G	Y	S	D	D	Q	I	Q	I	W	A	E	P	I	K	F	K	G	L	C	A	S	A	Q	V	E	A	M	N	Y	K	L	L	K	D	V
Template Known Secondary structure									S								S	S	S																	T	T	T	T	S								S		G	G	G															T	T
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions