Job Description A1L020 Confidence 93.03% Date Tue Apr 3 15:04:20 BST 2012 Rank 124 Aligned Residues 120 % Identity 26% Template c2xr1A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cleavage and polyadenylation specificity factor 100 kd PDBTitle: dimeric archaeal cleavage and polyadenylation specificity2 factor with n-terminal kh domains (kh-cpsf) from methanosarcina3 mazei Resolution 2.59 Å

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		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	C	K	I	K	A	L	R	A	K	T	N	T	Y	I	K	T	P	V	R	G	E	E	P	V	F	M	V	T	G	R	R	E	D	V	A	T	A	R	R	E	I	I	S	A	A	E	H	F	S	M	I	R	A	S	R	N	K	S	G	A	A	F	G	V	A	P	A	L	P	G	Q	V	T	I	R	V	R	V
Query Conservation
Alig confidence																				.	.										.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.										.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	N	I	I	R	N	L	A	K	E	L	R	T	R	I	A	M	.	.	R	P	D	P	R	V	L	A	T	.	.	.	.	.	.	P	E	D	S	I	S	I	I	E	E	V	V	P	K	E	S	V	I	S	S	Y	Y	F	D	P	D	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	I	I
Template Known Secondary structure			T											T	S					.	.				G	G	G				.	.	.	.	.	.												S		G	G	G									T	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.										.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.							.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.														.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.				260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		P	Y	R	V	V	G	L	V	V	G	P	K	G	A	T	I	K	R	I	Q	Q	Q	T	N	T	Y	I	I	T	.	.	.	P	S	R	D	R	D	P	V	F	E	I	T	G	A	P	G	N	V	E	R	A	R	E	E	I	E	T	H	I	A	V	R
Query Conservation																															.	.	.
Alig confidence																															.	.	.
Template Conservation
Template Sequence		E	A	E	K	P	G	L	V	I	G	K	H	G	A	T	L	R	E	I	T	K	Q	I	G	W	I	P	K	V	V	R	T	P	P	I	K	S	R	T	V	K	N	I	R	E	F	M	R	N	N	L	K	E	R	K	E	I	L	K	T	V	G	R	K
Template Known Secondary structure				S	S							S	S	S												S									S	S															T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions