Job Description A1L020 Confidence 99.94% Date Tue Apr 3 15:04:20 BST 2012 Rank 3 Aligned Residues 150 % Identity 23% Template c2jvzA_ PDB info PDB header:splicing Chain: A: PDB Molecule:far upstream element-binding protein 2; PDBTitle: solution nmr structure of the second and third kh domains2 of ksrp Resolution UNK

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.						.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.
Query SS confidence																																												.	.	.	.	.
Query Sequence		N	T	T	E	C	V	P	V	P	T	S	E	H	V	A	E	I	V	G	R	Q	G	C	K	I	K	A	L	R	A	K	T	N	T	Y	I	K	T	P	V	R	G	.	.	.	.	.	E	E	P	V	F	M	V	T	G	R	R	E	D	V	A	T	A	R	R	E	I	I	S	A	A	E	H	F	S	M	I	R	A
Query Conservation																																												.	.	.	.	.
Alig confidence											.																																	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation											.																																																															.	.	.	.	.	.	.
Template Sequence		G	T	V	Q	E	I	M	I	P	.	A	G	K	A	G	L	V	I	G	K	G	G	E	T	I	K	Q	L	Q	E	R	A	G	V	K	M	I	L	I	Q	D	G	S	Q	N	T	N	V	D	K	P	L	R	I	I	G	D	P	Y	K	V	Q	Q	A	C	E	M	V	M	D	I	L	.	.	.	.	.	.	.	R
Template Known Secondary structure											.	T	T						T		T	T	T									T	S		S								T	T	S	S	S	S	S																								T	.	.	.	.	.	.	.	T
Template Predicted Secondary structure											.																																																															.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.								.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.				.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		S	R	N	K	S	G	A	A	F	G	V	A	P	A	L	P	G	Q	V	T	I	R	V	R	V	P	Y	R	V	V	G	L	V	V	G	P	K	G	A	T	I	K	R	I	Q	Q	Q	T	N	T	Y	I	I	T	P	S	R	D	.	.	.	R	D	P	V	F	E	I	T	G	A	P	G	N	V	E	R	A	R	E
Query Conservation																																																												.	.	.
Alig confidence																																																												.	.	.
Template Conservation
Template Sequence		E	R	D	Q	G	G	F	G	D	R	N	E	Y	G	S	R	I	G	G	G	I	D	V	P	V	P	R	H	S	V	G	V	V	I	G	R	S	G	E	M	I	K	K	I	Q	N	D	A	G	V	R	I	Q	F	K	Q	D	D	G	T	G	P	E	K	I	A	H	I	M	G	P	P	D	R	C	E	H	A	A	R
Template Known Secondary structure			S	S	S				S	S		S	S		T	T	S		S	S	S	B						T	T	T							S	S	S										T											T	T	S	S								S
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		283	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	E	T	H	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	N	D	L	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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