Job Description A1L020 Confidence 99.93% Date Tue Apr 3 15:04:20 BST 2012 Rank 5 Aligned Residues 150 % Identity 24% Template c2e3uA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:hypothetical protein ph1566; PDBTitle: crystal structure analysis of dim2p from pyrococcus horikoshii ot3 Resolution 2.30 Å

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.				.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		T	E	C	V	P	V	P	T	S	E	H	V	A	E	I	V	G	R	Q	G	C	K	I	K	A	L	R	A	K	T	N	T	Y	I	K	T	P	V	R	G	E	.	.	.	E	P	V	F	M	V	T	G	R	R	E	D	V	A	T	A	R	R	E	I	I	S	A	A	E	H	F	S	M	I	R	A	S	R	N	K
Query Conservation																																											.	.	.
Alig confidence									.																																		.	.	.
Template Conservation									.
Template Sequence		E	E	Y	V	K	I	P	.	K	D	R	I	A	V	L	I	G	K	K	G	Q	T	K	K	E	I	E	K	R	T	K	T	K	I	T	I	D	S	E	T	G	E	V	W	I	T	S	T	K	E	T	E	D	P	L	A	V	W	K	A	R	D	I	V	L	A	I	G	R	G	F	S	P	E	R	A	F	R	L	L
Template Known Secondary structure									.										G	G	G											T							T	T	T									T	T			S																T	T							G	G	G	G
Template Predicted Secondary structure									.
Template SS confidence
		35	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	A	A	F	G	V	A	P	A	L	P	G	Q	V	T	I	R	V	R	V	P	Y	R	V	V	G	L	V	V	G	P	K	G	A	T	I	K	R	I	Q	Q	Q	T	N	T	Y	I	I	T	P	S	R	D	R	D	P	V	F	E	I	T	G	A	P	G	N	V	E	R	A	R	E	E	I	E	T	H	I	A
Query Conservation
Alig confidence							.	.	.	.	.																																										.	.	.	.
Template Conservation							.	.	.	.	.																																										.	.	.	.
Template Sequence		N	E	G	E	Y	.	.	.	.	.	L	E	I	I	N	L	T	D	I	I	A	L	P	R	V	R	G	R	I	I	G	R	K	G	R	T	R	Q	I	I	E	E	M	S	G	A	S	V	S	V	Y	.	.	.	.	G	K	T	V	A	I	I	G	N	P	I	Q	I	E	I	A	K	T	A	I	E	K	L	A	R
Template Known Secondary structure		S	T	T			.	.	.	.	.						G	G	G														G	G	G																		.	.	.	.	T	T																							T
Template Predicted Secondary structure							.	.	.	.	.																																										.	.	.	.
Template SS confidence
		114	.	.	.	.						.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.					160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	P
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		191	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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