Job Description A1L020 Confidence 99.72% Date Tue Apr 3 15:04:20 BST 2012 Rank 10 Aligned Residues 83 % Identity 67% Template c2dgrA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:ring finger and kh domain-containing protein 1; PDBTitle: solution structure of the second kh domain in ring finger2 and kh domain containing protein 1 Resolution UNK

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		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	A	P	A	L	P	G	Q	V	T	I	R	V	R	V	P	Y	R	V	V	G	L	V	V	G	P	K	G	A	T	I	K	R	I	Q	Q	Q	T	N	T	Y	I	I	T	P	S	R	D	R	D	P	V	F	E	I	T	G	A	P	G	N	V	E	R	A	R	E	E	I	E	T	H	I	A	V	R	T	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	S	G	S	S	G	G	Q	T	T	I	Q	V	R	V	P	Y	R	V	V	G	L	V	V	G	P	K	G	A	T	I	K	R	I	Q	Q	R	T	H	T	Y	I	V	T	P	G	R	D	K	E	P	V	F	A	V	T	G	M	P	E	N	V	D	R	A	R	E	E	I	E	A	H	I	T	L	R	S	G	P
Template Known Secondary structure				S			S			S																	T	T	T	T	S	S								T	T								S	S	S										T	T	T														S			S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		295	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		179	180	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions