Return to main results Retrieve Phyre Job Id

Job DescriptionA1L020
Confidence22.25%DateTue Apr 3 15:04:20 BST 2012
Rank242Aligned Residues34
% Identity21%Templatec2d9lA_
PDB info PDB header:gene regulationChain: A: PDB Molecule:nucleoporin-like protein rip; PDBTitle: solution structure of the arfgap domain of human rip
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   460.........470.........480.........490....
Predicted Secondary structure 




















Query SS confidence 


































Query Sequence  LRSPGGGRDCMVCFESEVTAALVPCGHNLFCMECA
Query Conservation         
 
 

 
  
 















Alig confidence 


























.






Template Conservation 
   
 
  




   
 


   

.


  

Template Sequence  MTGLPHNRKCFDCDQRGPTYVNMTVGS. FVCTSCS
Template Known Secondary structure  TTSTTTSB
SSS

BS

TTT

.


Template Predicted Secondary structure 
















.

Template SS confidence 


































   14.....20.........30.........40 .......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions