Job Description A1L020 Confidence 97.19% Date Tue Apr 3 15:04:20 BST 2012 Rank 113 Aligned Residues 91 % Identity 15% Template c2asbA_ PDB info PDB header:transcription/rna Chain: A: PDB Molecule:transcription elongation protein nusa; PDBTitle: structure of a mycobacterium tuberculosis nusa-rna complex Resolution 1.50 Å

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		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		V	A	E	I	V	G	R	Q	G	C	K	I	K	A	L	R	A	K	T	.	N	T	Y	I	K	T	P	V	R	G	E	E	P	V	F	M	V	T	G	R	R	E	D	V	A	T	A	R	R	E	I	I	S	A	A	E	H	F	S	M	I	R	A	S	R	N	K	S	G	A	A	F	G	V	A	P	A	L	P	G
Query Conservation																					.
Alig confidence																					.							.	.	.	.	.	.	.	.											.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.											.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	A	C	I	G	P	M	G	Q	R	V	R	N	V	M	S	E	L	S	G	E	K	I	D	I	.	.	.	.	.	.	.	.	I	D	Y	D	D	D	P	A	R	F	.	.	.	.	.	.	V	A	N	A	L	.	.	.	.	.	.	.	.	.	.	.	S	P	A	K	V	V	S	V	S	V	I	D	Q	T
Template Known Secondary structure								G	G	G										T	T	T						.	.	.	.	.	.	.	.					S	S					.	.	.	.	.	.					T	.	.	.	.	.	.	.	.	.	.	.	T	T	S			S							T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.											.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.									.	.	260	.	.	.	.	.	.	.							.	.	270	.	.												.	.	.	.	.	.	.	280	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	T	I	R	V	R	V	P	Y	R	V	V	G	L	V	V	G	P	K	G	A	T	I	K	R	I	Q	Q	Q	T	N	T	Y	I	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	A	A	R	V	V	V	P	D	F	Q	L	S	L	A	I	G	K	E	G	Q	N	A	R	L	A	A	R	L	T	G	W	R	I	D	I
Template Known Secondary structure		T	T								G	G	G							G	G	G											S
Template Predicted Secondary structure
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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