Job Description A1L020 Confidence 43.14% Date Tue Apr 3 15:04:20 BST 2012 Rank 181 Aligned Residues 67 % Identity 9% Template c1s1hC_ PDB info PDB header:ribosome Chain: C: PDB Molecule:40s ribosomal protein s3; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. Resolution 11.70 Å

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		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		I	R	V	R	V	P	Y	R	V	V	G	L	V	V	G	P	K	G	A	T	I	K	R	I	Q	Q	Q	T	N	T	Y	I	I	T	P	S	R	D	R	D	.	P	V	F	E	I	T	G	A	P	G	N	V	E	R	A	R	E	E	I	E	T	H	I	A	V	R	T
Query Conservation																																										.
Alig confidence																																										.
Template Conservation
Template Sequence		T	E	V	I	I	R	A	T	R	T	Q	D	V	L	G	E	N	G	R	R	I	N	E	L	T	L	L	V	Q	K	R	F	K	Y	A	P	G	T	I	V	L	Y	A	E	R	V	Q	D	R	G	L	S	A	V	A	Q	A	E	S	M	K	F	K	L	L	N	G	L
Template Known Secondary structure		B							S								G	G	G														S		T	T	T			B								S		G	G	G																T
Template Predicted Secondary structure
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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