Return to main results Retrieve Phyre Job Id

Job DescriptionQ8NFW5
Confidence99.82%DateFri May 25 09:40:17 BST 2012
Rank26Aligned Residues60
% Identity32%Templated2cufa1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Homeodomain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.........90.........100......... 110.........120.........130.
Predicted Secondary structure 













...............

Query SS confidence 





































. . . . . . . . . . . . . . .





















Query Sequence  RRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTN. . . . . . . . . . . . . . . LPEARVQVWFKNRRAKFRKKQR
Query Conservation                
                       ...............
       

 
 
        
Alig confidence 





































...............





















Template Conservation 

 
  

  

 


  
  
 


   
  

   
               

   
  





 
 
    
Template Sequence  RGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRAN
Template Known Secondary structure 


S




SS



TT



TTT


Template Predicted Secondary structure 





















Template SS confidence 










































































   8.10.........20.........30.........40.........50.........60.........70.........80..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions