Return to main results Retrieve Phyre Job Id

Job DescriptionQ8NFW5
Confidence99.54%DateFri May 25 09:40:17 BST 2012
Rank89Aligned Residues42
% Identity33%Templated2p81a1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Homeodomain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   87..90.........100.........110.........120........
Predicted Secondary structure 







Query SS confidence 









































Query Sequence  EKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK
Query Conservation                         
       

 
 
     
Alig confidence 









































Template Conservation 
  
  
 

    
  

  
 
   

 






 
 

Template Sequence  KREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNKRAKIKK
Template Known Secondary structure 




TT
TTT




Template Predicted Secondary structure 









Template SS confidence 









































   17..20.........30.........40.........50........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions