Return to main results Retrieve Phyre Job Id

Job DescriptionQ8NFW5
Confidence71.41%DateFri May 25 09:40:17 BST 2012
Rank107Aligned Residues53
% Identity11%Templatec3hugA_
PDB info PDB header:transcription/membrane proteinChain: A: PDB Molecule:rna polymerase sigma factor; PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   77..80.........90.........100.........110.........120.........130....
Predicted Secondary structure 











Query SS confidence 

























































Query Sequence  AFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQ
Query Conservation           
                       
       

 
 
           
Alig confidence 
















.....



































Template Conservation   
    
 
  
     ..... 
  


  
 

  

   
 

   

  
   
Template Sequence  QLSAEHRAVIQRSYYRG. . . . . WSTAQIATDLGIAEGTVKSRLHYAVRALRLTLQELG
Template Known Secondary structure  TS
TS
.....

TS
T
Template Predicted Secondary structure 



.....





Template SS confidence 

























































   122.......130........ .140.........150.........160.........170....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions