Return to main results Retrieve Phyre Job Id

Job DescriptionQ8NFW5
Confidence99.67%DateFri May 25 09:40:17 BST 2012
Rank76Aligned Residues55
% Identity22%Templatec2e19A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcription factor 8; PDBTitle: solution structure of the homeobox domain from human nil-2-2 a zinc finger protein, transcription factor 8
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   74.....80.........90.........100.........110.........120........
Predicted Secondary structure 













Query SS confidence 






















































Query Sequence  SRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK
Query Conservation              
                       
       

 
 
     
Alig confidence 






















































Template Conservation        
 

 


  
     
   
   

    
    
  






    
Template Sequence  SGQPPLKNLLSLLKAYYALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQAGQIS
Template Known Secondary structure  S




TT
SS

T

T
S
Template Predicted Secondary structure 













Template SS confidence 






















































   6...10.........20.........30.........40.........50.........60
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions