Return to main results Retrieve Phyre Job Id

Job DescriptionQ8NFW5
Confidence99.78%DateFri May 25 09:40:17 BST 2012
Rank50Aligned Residues52
% Identity37%Templated1du0a_
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Homeodomain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   77..80.........90.........100.........110.........120........
Predicted Secondary structure 










Query SS confidence 



















































Query Sequence  AFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK
Query Conservation           
                       
       

 
 
     
Alig confidence 



















































Template Conservation 


  

  

  
     
    
  

  


   

  





 
 

Template Sequence  AFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFANKRAKIKK
Template Known Secondary structure 



SS

T

TT
Template Predicted Secondary structure 











Template SS confidence 



















































   7..10.........20.........30.........40.........50........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions