Return to main results Retrieve Phyre Job Id

Job DescriptionQ8NFW5
Confidence54.10%DateFri May 25 09:40:17 BST 2012
Rank120Aligned Residues47
% Identity19%Templated1fsea_
SCOP infoDNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators GerE-like (LuxR/UhpA family of transcriptional regulators)
Resolution2.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   74.....80.........90.........100.........110.........120......
Predicted Secondary structure 













Query SS confidence 




















































Query Sequence  SRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKF
Query Conservation              
                       
       

 
 
   
Alig confidence 













......
































Template Conservation 
 
 

 

  

 ......    
 
  


  
 

  

      
  

Template Sequence  SKPLLTKREREVFE. . . . . . LLVQDKTTKEIASELFISEKTVRNHISNAMQKL
Template Known Secondary structure 





......TTT

TS
Template Predicted Secondary structure 





......






Template SS confidence 




















































   8.10.........20. ........30.........40.........50....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions