Return to main results Retrieve Phyre Job Id

Job DescriptionQ8NFW5
Confidence99.73%DateFri May 25 09:40:17 BST 2012
Rank64Aligned Residues77
% Identity27%Templated1lfup_
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Homeodomain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.........90.. .......100.........110.........120.........130.........140........
Predicted Secondary structure 







...






















Query SS confidence 




















. . .























































Query Sequence  RRSRTAFTAQQLEALEKTFQK. . . THYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGSH
Query Conservation                
      ...                 
       

 
 
                         
Alig confidence 




















...























































Template Conservation 

 
      
   
   
     



       

   

   

  

 
 
 
 

                   
Template Sequence  RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKSGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAAKTAVTA
Template Known Secondary structure  S
SSSSS
TTSTTS
S

SS
STTSS

Template Predicted Secondary structure 


























Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions