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Job Description | Q8NFW5 | Confidence | 99.77% | Date | Fri May 25 09:40:17 BST 2012 |
Rank | 55 | Aligned Residues | 59 |
% Identity | 29% | Template | c1ic8B_ |
PDB info |
PDB header:transcription/dna | Chain: B: PDB Molecule:hepatocyte nuclear factor 1-alpha; |
PDBTitle: hepatocyte nuclear factor 1a bound to dna : mody3 gene2 product
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Resolution | 2.60 Å |
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69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | |
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110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
R | K | Q | R | R | S | R | T | A | F | T | A | Q | Q | L | E | A | L | E | K | T | F | Q | K | T | H | Y | P | D | V | V | M | R | E | R | L | A | M | C | T | N | . |
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L | P | E | A | R | V | Q | V | W | F | K | N | R | R | A | K | F | R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Q | F | T | H | R | N | R | F | K | W | G | P | A | S | Q | Q | I | L | F | Q | A | Y | E | R | Q | K | N | P | S | K | E | E | R | E | T | L | V | E | E | C | N | R | A | E | C | I | Q | R | G | V | S | P | S | Q | A | Q | G | L | G | S | N | L | V | T | E | V | R | V | Y | N | W | F | A | N | R | R | K | E | E | A |
Template Known Secondary structure |   |
T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
176 | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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