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Job Description | Q8NFW5 | Confidence | 46.48% | Date | Fri May 25 09:40:17 BST 2012 |
Rank | 132 | Aligned Residues | 46 |
% Identity | 17% | Template | d1xsva_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| Sigma3 and sigma4 domains of RNA polymerase sigma factors
| YlxM/p13-like
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Resolution | 1.70 |
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78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
F | T | A | Q | Q | L | E | A | L | E | K | T | F | Q | K | T | H | Y | P | D | V | V | M | R | E | R | L | A | M | C | T | N | L | P | E | A | R | V | Q | V | W | F | K | N | R | R | A | K | F | R | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | T | N | K | Q | R | N | Y | L | E | L | F | Y | L | E | D | Y | . |
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S | L | S | E | I | A | D | T | F | N | V | S | R | Q | A | V | Y | D | N | I | R | R | T | G | D | L | V | E | D |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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