Return to main results Retrieve Phyre Job Id

Job DescriptionQ8NFW5
Confidence69.94%DateFri May 25 09:40:17 BST 2012
Rank109Aligned Residues30
% Identity20%Templated1or7a1
SCOP infoDNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   102.......110.........120.........130.
Predicted Secondary structure 


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Query Sequence  ERLAMCTNLPEARVQVWFKNRRAKFRKKQR
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Template Conservation   


  

 
  

   
 

   

  

Template Sequence  EEIAAIMDCPVGTVRSRIFRAREAIDNKVQ
Template Known Secondary structure  TTS

Template Predicted Secondary structure 




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   157..160.........170.........180......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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