Return to main results Retrieve Phyre Job Id

Job DescriptionQ8NFW5
Confidence99.77%DateFri May 25 09:40:17 BST 2012
Rank55Aligned Residues59
% Identity29%Templatec1ic8B_
PDB info PDB header:transcription/dnaChain: B: PDB Molecule:hepatocyte nuclear factor 1-alpha; PDBTitle: hepatocyte nuclear factor 1a bound to dna : mody3 gene2 product
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6970.........80.........90.........100......... 110.........120.......
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Query Sequence  RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTN. . . . . . . . . . . . . . . . . . . . . LPEARVQVWFKNRRAKFR
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Template Sequence  QFTHRNRFKWGPASQQILFQAYERQKNPSKEERETLVEECNRAECIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEA
Template Known Secondary structure  TT








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   176...180.........190.........200.........210.........220.........230.........240.........250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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