Return to main results Retrieve Phyre Job Id

Job DescriptionQ8NFW5
Confidence99.80%DateFri May 25 09:40:17 BST 2012
Rank40Aligned Residues63
% Identity27%Templated1hdpa_
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Homeodomain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90.........100.........110.........120.........130...
Predicted Secondary structure 
















Query SS confidence 






























































Query Sequence  QRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSL
Query Conservation                 
                       
       

 
 
          
Alig confidence 






























































Template Conservation 


 
  

  
   

  
  
  

      

    
   

  

 


 
 

    
Template Sequence  RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCS
Template Known Secondary structure 










S


TTTT

TTS

TTT
Template Predicted Secondary structure 






















Template SS confidence 






























































   1........10.........20.........30.........40.........50.........60...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions