Job Description Q8NFW5 Confidence 99.63% Date Fri May 25 09:40:17 BST 2012
Rank 85 Aligned Residues 80
% Identity 14% Template c2lk2A_
PDB info
PDB header: transcriptionChain: A: PDB Molecule: homeobox protein tgif1;
PDBTitle: solution nmr structure of homeobox domain (171-248) of human homeobox2 protein tgif1, northeast structural genomics consortium target3 hr4411b
Resolution UNK
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
73 . . . . . . 80 . . . . . . . . . 90 .
. . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . .
Predicted Secondary structure  
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Query Sequence  
R S R T A F T A Q Q L E A L E K T F Q .
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K T H Y P D V V M R E R L A M C T N L P E A R V Q V W F K N R R A K F R K K Q R S L Q K E Q L Q K Q K E A E G S H G
Query Conservation  
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Alig confidence  
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Template Conservation  
                                                                                                             
Template Sequence  
H H S H M L P K E S V Q I L R D W L Y E H R Y N A Y P S E Q E K A L L S Q Q T H L S T L Q V C N W F I N A R R R L L P D M L R K D G K D P N Q F T I S R R G A K
Template Known Secondary structure  
T S G G G S S S S S S S S S
Template Predicted Secondary structure  
Template SS confidence  
   
7 . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . .
 
   
150 . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
E G K
Query Conservation  
     
Alig confidence  
Template Conservation  
 
Template Sequence  
I S E
Template Known Secondary structure  
Template Predicted Secondary structure  
Template SS confidence  
   
87 . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]