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Job Description | Q8NFW5 | Confidence | 99.78% | Date | Fri May 25 09:40:17 BST 2012 |
Rank | 52 | Aligned Residues | 59 |
% Identity | 31% | Template | c1hf0A_ |
PDB info |
PDB header:transcription factor | Chain: A: PDB Molecule:octamer-binding transcription factor 1; |
PDBTitle: crystal structure of the dna-binding domain of oct-1 bound2 to dna as a dimer
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Resolution | 2.7 Å |
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70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | Q | R | R | S | R | T | A | F | T | A | Q | Q | L | E | A | L | E | K | T | F | Q | K | T | H | Y | P | D | V | V | M | R | E | R | L | A | M | C | T | N | L | P | E | A | R | V | Q | V | W | F | K | N | R | R | A | K | F | R | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | E | R | K | K | R | T | S | I | E | T | N | I | R | V | A | L | E | K | S | F | L | E | N | Q | K | P | T | S | E | E | I | T | M | I | A | D | Q | L | N | M | E | K | E | V | I | R | V | W | F | S | N | R | R | Q | K | E | K | R |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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