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Job DescriptionP19174
Confidence100.00%DateWed May 9 17:43:44 BST 2012
Rank2Aligned Residues732
% Identity34%Templatec3qr0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:phospholipase c-beta (plc-beta); PDBTitle: crystal structure of s. officinalis plc21
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80.........90 .......
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Query Sequence  LCRSLEVGTVMTLFYSKKSQRPERKTFQVKLETRQITWSRGADKIEGAIDIREIKEIRPGKTSRDF. . . . . . . DRYQEDP
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Template Conservation 

  
  
    
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Template Sequence  VPEQLIKGDKFLKW. EEGSSGFIEILLRVDPKGYFLYWKIEGKEDTQLLDLAYVRDIRCAKYAKPPKDKKIKEAGTNFGS
Template Known Secondary structure 


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TT




TTS


TT
SS
GGGGGGS



SSS
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   18.20.........30. ........40.........50.........60.........70.........80.........90......
 
   98.100.........110..... ....120.........130.........140.........150.........160.........170......
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Query Sequence  AFRPDQSHCFVILYGMEF. RLKTLSLQATSEDEVNMWIKGLTWLMEDTLQAPTPLQIERWLRKQFYSVDRNREDRISAKD
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Template Sequence  SNIPLQDKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYAYNLLSLNKNQLGEWEKLYFRLTTVEMEKNKIPVKA
Template Known Secondary structure  TTS

SSSSS
SST
T

TS

SS
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   97..100.........110.........120.........130.........140.........150.........160.........170......
 
   177..180.. .......190.........200.........210.........220.........230.........240.........250.
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Query Sequence  LKNMLS. . . . . QVNYRVPNMRFLRERLTDLEQRSGDITYGQFAQLYRSLMYSAQKTMDLPFLEASTLRAGERPELCRVSL
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Template Conservation 
 

          
      
   
   
      
 
 

  
   
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Template Sequence  IQKCLSKDKDDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLAL. . LERSEIEGIFKE. . . . . . . LSKNKGNITT
Template Known Secondary structure 
S
TS

STT
TTT

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T.......TTTSSS
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   177..180.........190.........200.........210.........220..... ....230....... ..240.......
 
   252.......260..... ....270.........280.... .....290.........300.........310.........320..
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Query Sequence  PEFQQFLLDYQGEL. . . . . . . WAVDRLQVQEFMLSFLRDP. . LREIEEPYFFLDEFVTFLFSKENSVWNSQLDAVCPDTM
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Template Sequence  VMFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDY. ESAVNKKGKKKGQLTKEGLLYFLMCEENNLTPMHRLDLGAN. M
Template Known Secondary structure  TSS
TTS
TTTS



.GGG
BTT
SGGG
SS
SS
S
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   248.250.........260.........270.........280... ......290.........300.........310.........320.... .
 
   323......330.........340.........350.........360.........370.........380.........390.........400..
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Query Sequence  NNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPDGMPVIYHGHTLTTKIKFSDVLHTIKEHAF
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Template Sequence  KLTLAAYYINSSHNTYLTGHQLTGKSSVEIYRQVLLTGCRCLELDCWDGKDGEPIITHGFTMCTEVLFKDVVYAIAESAF
Template Known Secondary structure 
S
GGG
BBSSTTBSS
TTTS
B
STT



TTSS


TTSS


TT
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   326...330.........340.........350.........360.........370.........380.........390.........400.....
 
   403......410.........420.........430.........440........ .450.........460.........470........
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Query Sequence  VASEYPVILSIEDHCSIAQQRNMAQYFKKVLGDTLLTKPVEISADG. . . . LPSPNQLKRKILIKHKKLAEGSAYEEVPTS
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Template Sequence  KVSDYPVILSFENHCSVAQQKLLAQYCNEAFGELLLDKPIDGHPLKPGVPLPTPYDLRKKILIKNKKMHGLTD. . . . . . .
Template Known Secondary structure  SS

S



GGGB

S

TT

SSTT




TTTTTT








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   406...410.........420.........430.........440.........450.........460.........470........
 
   479480.........490.........500.........510.........520.........530.........540.........550........
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Query Sequence  MMYSENDISNSIKNGILYLEDPVNHEWYPHYFVLTSSKIYYSEETSSDQGNEDEEEPKEVSSSTELHSNEKWFHGKLGAG
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Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
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   559560.........570.........580.........590.........600.........610.........620.........630........
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Query Sequence  RDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGTPKFFLTDNLVFDSLYDLITH
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Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   639640.........650.........660.........670.........680.........690.........700.........710........
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Query Sequence  YQQVPLRCNEFEMRLSEPVPQTNAHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAEGKIKHCRVQ
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   719720.........730.........740.........750.........760.........770.........780.........790........
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Query Sequence  QEGQTVMLGNSEFDSLVDLISYYEKHPLYRKMKLRYPINEEALEKIGTAEPDYGALYEGRNPGFYVEANPMPTFKCAVKA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   799800.........810.........820.........830.........840.........850.........860.........870........
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Query Sequence  LFDYKAQREDELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMVNPVALEPEREHLDENSPLGDLLRGVLDV
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
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   879880.........890.........900.........910.........920.........930.........940.........950........
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Query Sequence  PACQIAIRPEGKNNRLFVFSISMASVAHWSLDVAADSQEELQDWVKKIREVAQTADARLTEGKIMERRKKIALELSELVV
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Template Conservation  .................................................                        


 

 
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EEKKKIEKEKKDAGTAAKEAEAAEEMSALVN
Template Known Secondary structure  .................................................GGGGS




TT
S
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   489490.........500.........510.........
 
   959960.........970.........980.........990.........1000.........1010.........1020.........1030........
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Query Sequence  YCRPVPFDEEKIGTERACYRDMSSFPETKAEKYVNKAKGKKFLQYNRLQLSRIYPKGQRLDSSNYDPLPMWICGSQLVAL
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Template Sequence  YIQPVHFTTFEQAQKKDRHYEMSSMVETQALNKL. KDNPEDFVDYNKKQITRIYPKGTRVDSSNYVPQIYWNAGCQLVAL
Template Known Secondary structure  SS




T
TT.
TTTS


TT
TT




TTTT
S
B
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   520.........530.........540.........550... ......560.........570.........580.........590........
 
   10391040.........1050.........1060.........1070... ......1080.........1090.........1100.........1110......
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Query Sequence  NFQTPDKPMQMNQALFMTGRHCGYVLQPSTMRDEA. . FDPFDKSSLRGLEPCAISIEVLGARHLPKNGRGIVCPFVEIEV
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Template Sequence  NFQCFDIAMCVNLGVFEYNGCSGYLLKPEFMRKLDKRFDPFTESTVDGVVAGTIEIKIISAQFLSDKQ. . . ISSYVEVEM
Template Known Secondary structure 
TT

STTTTTT
S


TT



TT

S

TTS




SS
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   599600.........610.........620.........630.........640.........650.........660...... ...670.....
 
   1117..1120.... .....1130.........1140....... ..1150.........1160.........1170.........1180.........1190...
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Query Sequence  AGAEYDST. . KQKTEFVVDNGLNPVWPAKPFHF. QISNPEFAFLRFVVYEEDMFSDQNFLAQATFPVKGLKTGYRAVPLK
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Template Sequence  YGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEEN. . . . GKFIGHRVMPLDGIKPGYRHVPLR
Template Known Secondary structure  SSGGG



B
S
SS

B




S
GGG
TT....S
STT


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   676...680.........690.........700.........710.........720....... ..730.........740.........750.
 
   1194.....1200.........1210.........1220.........1230.......
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Query Sequence  NNYSEDLELASLLIKIDIFPAKENGDLSPFSGTSLRERGSDASG
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Template Sequence  NESNRPLGLASVFAHIVAKDYVS. . . . . YQSAQEARAAALCAFE
Template Known Secondary structure 
TTS



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SGGGGS
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   752.......760.........770.... .....780.........790
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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