Job Description P19174 Confidence 99.38% Date Wed May 9 17:43:44 BST 2012 Rank 44 Aligned Residues 121 % Identity 19% Template c3m7fB_ PDB info PDB header:signaling protein/ligase Chain: B: PDB Molecule:e3 ubiquitin-protein ligase nedd4; PDBTitle: crystal structure of the nedd4 c2/grb10 sh2 complex Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1089	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	S	I	E	V	L	G	A	R	H	L	P	K	N	G	R	G	I	V	C	P	F	V	E	I	E	V	A	G	A	E	Y	D	S	T	K	Q	K	T	E	F	V	V	D	N	G	L	N	P	V	W	P	A	K	P	F	H	F	Q	I	S	N	P	E	F	A	F	L	R	F	V	V	Y	E	E	D	M	F	S
Query Conservation
Alig confidence																	.	.																																					.												.												.	.	.
Template Conservation																	.	.																																					.												.												.	.	.
Template Sequence		V	V	R	V	K	V	I	A	G	I	G	L	A	I	L	.	.	G	A	S	D	P	Y	V	R	V	T	L	Y	D	P	M	S	G	I	L	T	S	V	Q	T	K	T	I	K	K	S	L	N	P	K	W	N	.	E	E	I	L	F	R	V	L	P	Q	R	.	H	R	I	L	F	E	V	F	D	E	N	.	.	.
Template Known Secondary structure												S					.	.														T	T	T												S	S		S	S					.									T	T	T	.												.	.	.
Template Predicted Secondary structure																	.	.																																					.												.												.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.
		1169	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.				.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		D	Q	N	F	L	A	Q	A	T	F	P	V	K	G	L	K	T	G	.	.	.	Y	R	A	V	P	L	K	N	N	Y	S	E	D	L	E	L	A	S	L	L	I	K	I	D	I	F	P	A	K	E	N
Query Conservation																				.	.	.
Alig confidence		.																		.	.	.
Template Conservation		.
Template Sequence		.	D	D	F	L	G	Q	V	D	V	P	L	Y	P	L	P	T	E	P	Y	T	F	K	D	F	V	L	H	P	R	S	H	K	S	R	V	K	G	Y	L	R	L	K	M	T	Y	L	P	T	H	L	P
Template Known Secondary structure		.											S		S			B											B		S	S	T	T					S
Template Predicted Secondary structure		.
Template SS confidence
			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions