Job Description P19174 Confidence 99.13% Date Wed May 9 17:43:44 BST 2012 Rank 90 Aligned Residues 119 % Identity 21% Template c2r83B_ PDB info PDB header:endocytosis, exocytosis Chain: B: PDB Molecule:synaptotagmin-1; PDBTitle: crystal structure analysis of human synaptotagmin 1 c2a-c2b Resolution 2.70 Å

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		1089	1090	.	.	.	.	.	.	.	.	.	1100	.		.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.			.	.	.	.	.	1160	.	.	.	.	.
Predicted Secondary structure															.																																																						.	.
Query SS confidence															.																																																						.	.
Query Sequence		A	I	S	I	E	V	L	G	A	R	H	L	P	.	K	N	G	R	G	I	V	C	P	F	V	E	I	E	V	A	G	A	E	Y	D	S	T	K	Q	K	T	E	F	V	V	D	N	G	L	N	P	V	W	P	A	K	P	F	H	F	Q	I	S	N	P	E	F	.	.	A	F	L	R	F	V	V	Y	E	E	D
Query Conservation															.																																																						.	.
Alig confidence															.																.	.															.									.													.	.
Template Conservation																															.	.															.									.
Template Sequence		Q	L	L	V	G	I	I	Q	A	A	E	L	P	A	L	D	M	G	G	T	S	D	P	Y	V	K	V	F	L	.	.	L	P	D	K	K	K	K	F	E	T	K	V	H	R	.	K	T	L	N	P	V	F	N	.	E	Q	F	T	F	K	V	P	Y	S	E	L	A	G	K	T	L	V	M	A	V	Y	D	F	D
Template Known Secondary structure															S		S	S	T	T											.	.		T			S										.	S		S	S					.									G	G	G		T	T
Template Predicted Secondary structure																															.	.															.									.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		1166	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.					.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.
Predicted Secondary structure																												.	.	.	.
Query SS confidence																												.	.	.	.
Query Sequence		M	F	S	D	Q	N	F	L	A	Q	A	T	F	P	V	K	G	L	K	T	G	Y	R	A	V	P	.	.	.	.	L	K	N	N	Y	S	E	D	L	E	L	A	S	L	L	I	K	I	D	I
Query Conservation																												.	.	.	.
Alig confidence																												.	.	.	.
Template Conservation
Template Sequence		R	F	S	K	H	D	I	I	G	E	F	K	V	P	M	N	T	V	D	F	G	H	V	T	E	E	W	R	D	L	Q	S	A	E	K	E	E	Q	E	K	L	G	D	I	C	F	S	L	R	Y
Template Known Secondary structure		S	S	S												G	G	G				S	S									B			S	S
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions