Job Description P19174 Confidence 99.40% Date Wed May 9 17:43:44 BST 2012 Rank 38 Aligned Residues 106 % Identity 19% Template c2q3xA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:regulating synaptic membrane exocytosis protein 1; PDBTitle: the rim1alpha c2b domain Resolution 1.73 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1089	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	S	I	E	V	L	G	A	R	H	L	P	K	N	G	R	G	I	V	C	P	F	V	E	I	E	V	A	G	A	E	Y	D	S	T	K	Q	K	T	E	F	V	V	D	N	G	L	N	P	V	W	P	A	K	P	F	H	F	Q	I	S	N	P	E	F	A	F	L	R	F	V	V	Y	E	E	D	M	F	S
Query Conservation
Alig confidence																		.																												.									.
Template Conservation																		.																												.									.
Template Sequence		Q	L	E	V	E	V	I	R	A	R	S	L	T	Q	K	P	.	S	T	P	A	P	Y	V	K	V	Y	L	L	E	N	G	A	C	I	A	K	K	K	T	R	I	A	R	.	K	T	L	D	P	L	Y	Q	.	Q	S	L	V	F	D	E	S	P	Q	G	K	V	L	Q	V	I	V	W	G	D	Y	G	R	X	D
Template Known Secondary structure												S						.														T	T													.	S		S	S					.						S	S			T	T												S	T	T
Template Predicted Secondary structure																		.																												.									.
Template SS confidence
		1475	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490		.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.		.	.	1520	.	.	.	.	.		.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.
		1169	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.				.	.	1190	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		D	Q	N	F	L	A	Q	A	T	F	P	V	K	G	L	K	T	G	Y	.	.	.	R	A	V	P	L	K	N	N	Y	S
Query Conservation																					.	.	.
Alig confidence																					.	.	.
Template Conservation
Template Sequence		H	K	C	F	X	G	V	A	Q	I	L	L	E	E	L	D	L	S	S	X	V	I	G	W	Y	K	L	F	P	P	S	S
Template Known Secondary structure		S	S										G	G	G	S		T	T	S									B		G	G	G
Template Predicted Secondary structure
Template SS confidence
		1555	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions