Job Description P19174 Confidence 97.61% Date Wed May 9 17:43:44 BST 2012 Rank 308 Aligned Residues 139 % Identity 12% Template c2julA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:calsenilin; PDBTitle: nmr structure of dream Resolution UNK

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		154	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure													.																														.
Query SS confidence													.																														.
Query Sequence		E	R	W	L	R	K	Q	F	Y	S	V	.	D	R	N	R	E	D	R	I	S	A	K	D	L	K	N	M	L	S	Q	V	N	Y	R	V	P	N	M	R	F	.	L	R	E	R	L	T	D	L	E	Q	R	S	G	D	I	T	Y	G	Q	F	A	Q	L	Y	R	S	L	M	Y	S	A	Q	K	T	M	D	L	P
Query Conservation													.																														.
Alig confidence													.																														.
Template Conservation
Template Sequence		K	K	E	L	Q	S	L	Y	R	G	F	K	N	E	C	P	T	G	L	V	D	E	D	T	F	K	L	I	Y	S	Q	F	F	P	Q	G	D	A	T	T	Y	A	H	F	L	F	N	A	F	D	A	D	G	N	G	A	I	H	F	E	D	F	V	V	G	L	S	I	L	L	R	G	T	V	H	E	K	L	K	W
Template Known Secondary structure																	T	T	S	S																S	S													S	S		S			S				S												S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.										.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.
Query Sequence		F	L	E	A	S	T	L	R	A	G	E	R	P	E	L	C	R	V	S	L	P	E	F	Q	Q	F	L	L	D	Y	.	.	.	.	.	.	.	.	.	Q	G	E	L	W	A	V	D	R	L	Q	V	Q	E	F	M	L	S	F	L	R	D	P	L	R	E	I	E	E	P	Y	F	F	L	D	E	F	V	T	F	L
Query Conservation																																.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.																					.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation							.	.	.	.	.																																																	.	.	.	.	.
Template Sequence		A	F	N	L	Y	.	.	.	.	.	D	I	N	K	D	G	C	I	T	K	E	E	M	L	A	I	M	K	S	I	Y	D	M	M	G	R	H	T	Y	P	I	L	R	E	D	A	P	L	E	H	V	E	R	F	F	Q	K	M	.	.	.	.	.	D	R	N	Q	D	G	V	V	T	I	D	E	F	L	E	T	C
Template Known Secondary structure						T	.	.	.	.	.			S	S	S	S		B																					S			S																S	.	.	.	.	.			S	T	T		S	B
Template Predicted Secondary structure							.	.	.	.	.																																																	.	.	.	.	.
Template SS confidence
		170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.						.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions