Job Description P19174 Confidence 98.96% Date Wed May 9 17:43:44 BST 2012 Rank 138 Aligned Residues 93 % Identity 22% Template c2izvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:suppressor of cytokine signaling 4; PDBTitle: crystal structure of socs-4 in complex with elongin-b and2 elongin-c at 2.55a resolution Resolution 2.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		653	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.		.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730
Predicted Secondary structure																																															.																																		.
Query SS confidence																																															.																																		.
Query Sequence		L	S	E	P	V	P	Q	T	N	A	H	E	S	K	E	W	Y	H	A	S	L	T	R	A	Q	A	E	H	M	L	M	R	V	P	R	D	G	A	F	L	V	R	K	R	N	.	E	P	N	S	Y	A	I	S	F	R	A	E	G	K	I	K	H	C	R	V	Q	Q	E	G	Q	T	V	M	L	G	N	S	E	.
Query Conservation																																															.																																		.
Alig confidence																																		.													.																																		.
Template Conservation																																		.
Template Sequence		Q	S	M	L	V	P	D	L	L	Q	I	N	N	N	P	C	Y	W	G	V	M	D	K	Y	A	A	E	A	L	L	E	G	.	K	P	E	G	T	F	L	L	R	D	S	A	Q	E	D	Y	L	F	S	V	S	F	R	R	Y	S	R	S	L	H	A	R	I	E	Q	W	N	H	N	F	S	F	D	A	H	D	P
Template Known Secondary structure							T	T								T	T															T	T	.			T	T								S	S	T	T		S								T	T											T	T				S		T	T		T
Template Predicted Secondary structure																																		.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
						731	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	F	D	S	L	V	D	L	I	S	Y	Y	E	K	H	P	L
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		C	V	F	H	S	P	D	I	T	G	L	L	E	H	Y	K	D	P	S	A
Template Known Secondary structure		T	S			B	S	S								T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions