Job Description P19174 Confidence 97.87% Date Wed May 9 17:43:44 BST 2012 Rank 254 Aligned Residues 143 % Identity 11% Template c2ekwC_ PDB info PDB header:contractile protein Chain: C: PDB Molecule:myosin catalytic light chain lc-1, mantle muscle; PDBTitle: the crystal structure of squid myosin s1 in the presence of2 so4 2- Resolution 3.30 Å

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		157	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		L	R	K	Q	F	Y	S	V	D	.	.	R	N	R	E	D	R	I	S	A	K	D	L	K	N	M	L	S	Q	V	N	Y	R	V	P	N	M	R	F	L	R	E	R	L	T	D	L	E	Q	R	S	G	D	I	T	Y	G	Q	F	A	Q	L	Y	R	S	L	M	Y	S	A	Q	K	T	M	D	L	P	F	L	E
Query Conservation											.	.
Alig confidence											.	.																												.																												.	.
Template Conservation																																								.																												.	.
Template Sequence		V	R	E	V	F	D	L	F	D	F	W	D	G	R	D	G	D	V	D	A	A	K	V	G	D	L	L	R	C	L	G	M	N	P	T	E	A	Q	.	V	H	Q	H	G	G	T	K	K	M	G	E	K	A	Y	K	L	E	E	I	L	P	I	Y	E	E	M	.	.	S	S	K	D	T	G	T	A	A	D	E	F
Template Known Secondary structure															S	S	S				G	G	G									T								.				T	T			S	S	S	S	S																.	.	T	T				S
Template Predicted Secondary structure																																								.																												.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	T	L	R	A	G	E	R	P	E	L	C	R	V	S	L	P	E	F	Q	Q	F	L	L	D	Y	Q	G	E	L	W	A	V	D	R	L	Q	V	Q	E	F	M	L	S	F	L	R	D	P	L	R	E	I	E	E	P	Y	F	F	L	D	E	F	V	T	F	L	F	S	K	E	N	S
Query Conservation
Alig confidence																															.	.	.																				.	.	.
Template Conservation																															.	.	.																				.	.	.
Template Sequence		M	E	A	F	K	T	F	D	R	E	G	Q	G	L	I	S	S	A	E	I	R	N	V	L	K	M	L	G	E	.	.	.	R	I	T	E	D	Q	C	N	D	I	F	T	F	C	D	I	R	E	D	.	.	.	I	D	G	N	I	K	Y	E	D	L	M	K	K	V	M	A	G	P	F	P
Template Known Secondary structure							T	T		T	T	S	S	S														S	S	S	.	.	.															T					.	.	.	T	T													T	T		S	S
Template Predicted Secondary structure																															.	.	.																				.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions