Return to main results Retrieve Phyre Job Id

Job DescriptionP19174
Confidence96.82%DateWed May 9 17:43:44 BST 2012
Rank495Aligned Residues100
% Identity16%Templatec2d9zA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:protein kinase c, nu type; PDBTitle: solution structure of the ph domain of protein kinase c, nu2 type from human
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80.........90.........100........
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  LEVGTVMTLFYSKKSQRPERKTFQVKLETRQITWSRGADKIEGAIDIREIKEIRPGKTSRDFDRYQEDPAFRPDQSHCFV
Query Conservation 
  
  
 

  

 

   
 
 

 
   
 
  
 

    
 
  




 
  
   
               

Alig confidence 









..


















































........








Template Conservation   
 


 
  ..     



 


    
 


      
 
 
 
  
  
          ........       
 
Template Sequence  VKEGWMVHYT. . SRDNLRKRHYWRLDSKCLTLFQNESGSKYYKEIPLSEILRISSPRDFTNIS. . . . . . . . QGSNPHCFE
Template Known Secondary structure  ..SS



SS
S
SS

S



TTT



TT



SS........S
S


S
Template Predicted Secondary structure 
..
































........




Template SS confidence 















































































   910........ .20.........30.........40.........50.........60......... 70........
 
   109110.........120...... ...130.........140..
Predicted Secondary structure 






...............
Query SS confidence 

















. . . . . . . . . . . . . . .















Query Sequence  ILYGMEFRLKTLSLQATS. . . . . . . . . . . . . . . EDEVNMWIKGLTWLME
Query Conservation 



     
 
 


 
...............      
  

  
  
Alig confidence 




....








...............















Template Conservation 
 
  ....
 
                
     
    
  

  
  
Template Sequence  IITDT. . . . MVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALM
Template Known Secondary structure 
SS....

B

S

S

TTTTTTT
B
Template Predicted Secondary structure 


....














Template SS confidence 
















































   7980... ......90.........100.........110.........120...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions