Job Description P19174 Confidence 97.86% Date Wed May 9 17:43:44 BST 2012 Rank 255 Aligned Residues 140 % Identity 13% Template c2ccmB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:calexcitin; PDBTitle: x-ray structure of calexcitin from loligo pealeii at 1.8a Resolution 1.8 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		157	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure										.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	K	Q	F	Y	S	V	.	D	R	N	R	E	D	R	I	S	A	K	D	L	K	N	M	L	S	Q	V	N	Y	R	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	M	R	F	L	R	E	R	L	T	D	L	E	Q	R	S	G	D	I	T	Y	G	Q	F	A	Q	L	Y	R	S	L
Query Conservation										.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	R	V	F	N	T	F	Y	D	C	N	H	D	G	V	I	E	W	D	D	F	E	L	A	I	K	K	I	C	N	L	H	S	W	P	T	D	G	K	K	H	N	E	A	R	A	T	L	K	L	I	W	D	G	L	R	K	Y	A	D	E	N	E	D	E	Q	V	T	K	E	E	W	L	K	M	W	A	E	C
Template Known Secondary structure									T	T		T	T		S	S																		T	T			T	T	S																							T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		221	.	.	.											.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.
Query Sequence		M	Y	S	A	.	.	.	.	.	.	.	.	.	.	Q	K	T	M	D	L	P	F	L	E	A	S	T	L	R	A	G	E	R	P	E	L	C	R	V	S	L	P	E	F	Q	Q	F	L	L	D	Y	Q	G	E	L	W	A	V	D	R	L	Q	V	Q	E	F	M	L	S	F	L	R	D	P	L	R	E	I	E	E
Query Conservation						.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.																							.	.	.	.	.																.	.	.	.	.
Template Conservation																											.	.	.	.	.	.																							.	.	.	.	.																.	.	.	.	.
Template Sequence		V	K	S	V	E	K	G	E	S	L	P	E	W	L	T	K	Y	M	N	F	M	F	D	V	N	.	.	.	.	.	.	D	T	S	G	D	N	I	I	D	K	H	E	Y	S	T	V	Y	M	S	Y	G	I	.	.	.	.	.	P	K	S	D	C	D	A	A	F	D	T	L	S	D	G	.	.	.	.	.	G	K
Template Known Secondary structure							T	T																			.	.	.	.	.	.		T	T		S	S	B											G	G	G	T		.	.	.	.	.													T	G	G	.	.	.	.	.	G	T
Template Predicted Secondary structure																											.	.	.	.	.	.																							.	.	.	.	.																.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150	.	.	.	.	.						.	.
		291	.	.	.	.	.	.	.	.					300	.	.	.	.	.	.						.	.	.	310	.	.
Predicted Secondary structure											.	.	.	.								.	.	.	.	.
Query SS confidence											.	.	.	.								.	.	.	.	.
Query Sequence		P	Y	F	F	L	D	E	F	V	.	.	.	.	T	F	L	F	S	K	E	.	.	.	.	.	N	S	V	W	N	S
Query Conservation											.	.	.	.								.	.	.	.	.
Alig confidence											.	.	.	.								.	.	.	.	.
Template Conservation
Template Sequence		T	M	V	T	R	E	I	F	A	R	L	W	T	E	Y	F	V	S	N	D	R	G	A	K	G	N	H	L	F	G	T
Template Known Secondary structure		S			B																	T	T		G	G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions