 |
| Job Description | P19174 | | Confidence | 98.78% | Date | Wed May 9 17:43:44 BST 2012 |
| Rank | 163 | Aligned Residues | 92 |
| % Identity | 22% | Template | c1xa6A_ |
| PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:beta2-chimaerin; |
PDBTitle: crystal structure of the human beta2-chimaerin
|
| Resolution | 3.20 Å |
|
 |
|   |   |
644 | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | |
. | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | R | C | N | E | F | E | M | R | L | S | E | P | V | P | Q | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
N | A | H | E | S | K | E | W | Y | H | A | S | L | T | R | A | Q | A | E | H | M | L | M | R | V | P | R | D | G | A | F | L | V | R | K | R | N | . |
E | P | N | S | Y | A | I | S | F | R | A | E | G | K | I | K |
| Query Conservation |   |
  |
|   |   |   |
|   |   |   |
|   |   |
|   |
|
|
| . | . | . | . | . | . | . | . | . |   |   |
|
|   |
|   |
|
|
|   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|
|
|
|
|   |
|
| . |   |
|   |
|
|
|
|
|
|   |   |   |
|   |
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|   | . | . |   |   |   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |
| Template Sequence |   |
W | K | S | Y | L | Y | Q | L | Q | Q | E | A | P | R | P | K | R | I | I | C | P | R | E | V | E | N | R | P | K | Y | Y | G | R | E | F | H | G | I | I | S | R | E | Q | A | D | E | L | L | G | . |
. |
G | V | E | G | A | Y | I | L | R | E | S | Q | R | Q | P | G | C | Y | T | L | A | L | R | F | G | N | Q | T | L |
| Template Known Secondary structure |   |
S |
|
|  |  |  |  |  |  |  |  | S |
|
|
|
| B |
|
|
|
| S | S |
|
|
| S | S |
| S | S |
| S | S |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
| . | . | S |
| T | T | B |  |  |  |  |  |
| S | S | S | T | T |
|  |  |  |  |  |  |  | T | T |  |  |  |
| Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
. | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
|   |
|   |   |
714 | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
H | C | R | V | Q | Q | E | G | Q | T | V | M | L | G | N | S | E | F | D | S | L | V | D | L | I |
| Query Conservation |   |
  |   |
|
|   |   |   |
|   |   |   |   |   |
|   |   |   |
|
|
|
|   |
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|
|   |   |
|   |   |   |   | . |   |   |   |
|   |
|   |
|
|   |   |
|
|
| Template Sequence |   |
N | Y | R | L | F | H | D | G | K | H | F | . |
V | G | E | K | R | F | E | S | I | H | D | L | V |
| Template Known Secondary structure |   |
 |
|
|
|  |  | S | S | S |  |  | . |
| S | S | S |
|
|
|
| S | S |  |  |  |
| Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
102 | . | . | . | . | . | . | . | 110 | . | . | |
. | . | . | . | . | . | . | 120 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|