Job Description P19174 Confidence 97.29% Date Wed May 9 17:43:44 BST 2012 Rank 366 Aligned Residues 81 % Identity 14% Template c1wlzD_ PDB info PDB header:unknown function Chain: D: PDB Molecule:cap-binding protein complex interacting protein PDBTitle: crystal structure of djbp fragment which was obtained by2 limited proteolysis Resolution 1.60 Å

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	L	T	W	L	M	E	D	T	L	Q	A	P	T	P	L	Q	I	E	R	W	L	R	K	Q	F	Y	S	V	D	R	N	R	E	D	R	I	S	A	K	D	L	K	N	M	L	S	Q	V	N	Y	R	V	P	N	M	R	F	L	R	E	R	L	T	D	L	E	Q	R	S	G	D	I	T	Y	G	Q	F	A
Query Conservation
Alig confidence																						.	.
Template Conservation																						.	.
Template Sequence		T	A	D	R	D	I	L	A	R	L	H	K	A	V	T	S	H	Y	H	A	.	.	I	T	Q	E	F	E	N	F	D	T	M	K	T	N	T	I	S	R	E	E	F	R	A	I	C	N	R	R	V	Q	I	L	T	D	E	Q	F	D	R	L	W	N	E	M	P	V	N	A	K	G	R	L	K	Y	P	D	F	L
Template Known Secondary structure																		S				.	.										T	T			S															T													T	T	S		B		T	T	S
Template Predicted Secondary structure																						.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		215	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	F
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		308	.	310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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