Job Description P19174 Confidence 97.16% Date Wed May 9 17:43:44 BST 2012 Rank 402 Aligned Residues 93 % Identity 13% Template c1u5fA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:src-associated adaptor protein; PDBTitle: crystal structure of the ph domain of skap-hom with 8 vector-derived2 n-terminal residues Resolution 1.90 Å

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		35	.	.	.	.	40	.	.	.				.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		M	T	L	F	Y	S	K	K	S	.	.	.	Q	R	P	E	R	K	T	F	Q	V	K	L	E	T	R	Q	I	T	W	S	R	G	A	D	K	I	E	G	A	I	D	I	R	E	I	K	E	I	R	P	G	K	T	S	R	D	F	D	R	Y	Q	E	D	P	A	F	R	P	D	Q	S	H	C	F	V	I	L	Y
Query Conservation											.	.	.
Alig confidence											.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	K	R	R	K	D	H	S	F	L	G	F	E	W	Q	K	R	W	C	A	L	S	K	T	V	F	Y	Y	Y	G	S	D	K	D	K	Q	Q	K	G	E	F	A	I	D	G	Y	D	V	R	M	N	N	T	L	R	K	D	G	K	.	.	.	.	.	.	.	.	.	.	.	K	D	C	C	F	E	I	C	A
Template Known Secondary structure									S	S		S	S		S										T	T						S	S	T	T		S	S		S						T	T							T	T	S		S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.												.	.	.	.	.	.	.	190	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	E	F	R	L	K	T	L	S	L	Q	A	T	S	E	D	E	V	N	M	W	I	K	G	L	T	W	L	M
Query Conservation
Alig confidence					.	.	.
Template Conservation					.	.	.
Template Sequence		P	D	K	.	.	.	R	I	Y	Q	F	T	A	A	S	P	K	D	A	E	E	W	V	Q	Q	L	K	F	I	L
Template Known Secondary structure		T	T	S	.	.	.								S	S
Template Predicted Secondary structure					.	.	.
Template SS confidence
		192	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions