Job Description P19174 Confidence 97.00% Date Wed May 9 17:43:44 BST 2012 Rank 450 Aligned Residues 133 % Identity 12% Template c1qxpB_ PDB info PDB header:hydrolase chimera Chain: B: PDB Molecule:mu-like calpain; PDBTitle: crystal structure of a mu-like calpain Resolution 2.80 Å

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		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	K	Q	F	Y	S	V	D	R	N	R	E	D	R	I	S	A	K	D	L	K	N	M	L	S	Q	V	N	Y	R	V	P	N	M	R	F	L	R	E	R	L	T	D	L	E	Q	R	S	G	D	I	T	Y	G	Q	F	A	Q	L	Y	R	S	L	M	Y	S	A	Q	K	T	M	D	L	P	F	L	E	A	S
Query Conservation
Alig confidence																																				.																														.	.	.	.	.	.	.	.	.
Template Conservation																																				.																														.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	T	I	F	R	K	F	D	L	D	K	S	G	S	M	S	A	Y	E	M	R	M	A	I	E	A	A	G	F	K	L	P	C	.	Q	L	H	Q	V	I	V	A	R	F	A	D	D	E	L	I	I	D	F	D	N	F	V	R	C	L	V	R	L	.	.	.	.	.	.	.	.	.	E	I	L	F	K	I	F
Template Known Secondary structure							G	G	G		S	S	S	S	S	B											T	T	T	T						.											S		S	S	S			B												.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.																														.	.	.	.	.	.	.	.	.
Template SS confidence
		609	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.		.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.										.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.																							.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	R	A	G	E	R	P	E	L	C	R	V	S	L	P	E	F	Q	Q	F	L	L	D	Y	Q	G	E	L	W	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	L	Q	V	Q	E	F	M	L	S	F	L	R	D	P	L	R	E	I	E	E	P	Y	F	F
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.
Template Sequence		K	Q	L	D	P	E	N	T	G	T	I	Q	L	D	L	I	S	W	L	S	F	S	V	L	M	H	Y	S	N	N	E	S	E	E	R	Q	F	R	K	L	F	V	Q	L	M	E	V	S	A	T	E	L	M	F	G	I	D	T	C	R	S	M	V	A	V	M	D	S	D	.	.	.	.	.	T	T	G	K	L	G
Template Known Secondary structure						T	T			S																										T	T	T	T			S	S							S	T	T	T				S					T	T						S	S	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																																							.	.	.	.	.
Template SS confidence
		679	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.						.	.	750	.	.	.
		295	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	E	F	V	T	F	L	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	E	F	K	Y	L	W	N	N
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		786	.	.	.	790	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions