Job Description P19174 Confidence 97.60% Date Wed May 9 17:43:44 BST 2012 Rank 311 Aligned Residues 141 % Identity 13% Template c1eg4A_ PDB info PDB header:structural protein Chain: A: PDB Molecule:dystrophin; PDBTitle: structure of a dystrophin ww domain fragment in complex2 with a beta-dystroglycan peptide Resolution 2.00 Å

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		157	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.														.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	K	Q	F	Y	S	V	D	R	N	R	.	.	.	.	E	D	R	I	S	A	K	D	L	K	N	M	L	S	Q	V	N	Y	R	V	P	N	M	R	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	R	E	R	L	T	D	L	E	Q	R	S	G	D	I	T	Y	G	Q	F	A	Q	L	Y	R	S
Query Conservation														.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	A	A	C	D	A	L	D	Q	H	N	L	K	Q	N	D	Q	P	M	D	I	L	Q	I	I	N	C	L	T	T	I	Y	D	R	L	E	Q	E	H	N	N	L	V	N	V	P	L	C	V	D	M	C	L	N	W	L	L	N	V	Y	D	T	G	R	T	G	R	I	R	V	L	S	F	K	T	G	I	I	S
Template Known Secondary structure												T	T				T	T	S																						S	S	S	S																				T	T			S
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.									.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.								.	.
Query SS confidence																																													.	.	.	.	.	.	.	.								.	.
Query Sequence		L	M	Y	S	A	Q	K	T	M	D	L	P	F	L	E	A	S	T	L	R	A	G	E	R	P	E	L	C	R	V	S	L	P	E	F	Q	Q	F	L	L	D	Y	Q	.	.	.	.	.	.	.	.	G	E	L	W	A	V	D	.	.	R	L	Q	V	Q	E	F	M	L	S	F	L	R	D	P	L	R	E	I	E
Query Conservation																																													.	.	.	.	.	.	.	.								.	.
Alig confidence																		.	.	.	.	.	.																						.	.	.	.	.	.	.	.								.	.												.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.																																																		.	.	.	.	.	.	.
Template Sequence		L	C	K	A	H	L	E	D	K	Y	R	Y	L	F	K	Q	.	.	.	.	.	.	V	A	S	S	T	G	F	C	D	Q	R	R	L	G	L	L	L	H	D	S	I	Q	I	P	R	Q	L	G	E	V	A	S	F	G	G	S	N	I	E	P	S	V	R	S	C	F	Q	F	A	.	.	.	.	.	.	.	N	N
Template Known Secondary structure		T	S	S	S													.	.	.	.	.	.		S		T	T	S		B																			T	T		G	G	G	G	T		S													T	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.																																																		.	.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.							.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270								.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	Y	F	F	L	D	E	F	V	T	F	L	F	S	K	E	N	S	V	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	E	I	E	A	A	L	F	L	D	W	M	R	L	E	P	Q	S	M	V
Template Known Secondary structure			S		B											T			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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