Job Description P06241 Confidence 100.00% Date Sat Jun 16 10:36:34 BST 2012 Rank 136 Aligned Residues 241 % Identity 22% Template c3qd2B_ PDB info PDB header:gene regulation Chain: B: PDB Molecule:eukaryotic translation initiation factor 2-alpha kinase 3; PDBTitle: crsytal structure of mouse perk kinase domain Resolution 2.81 Å

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		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.			.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																								.												.	.																																					.	.	.	.	.	.	.	.
Query SS confidence																								.												.	.																																					.	.	.	.	.	.	.	.
Query Sequence		E	S	L	Q	L	I	K	R	L	G	N	G	Q	F	G	E	V	W	M	G	T	W	.	N	G	N	T	K	V	A	I	K	T	L	.	.	K	P	G	T	M	S	P	E	S	F	L	E	E	A	Q	I	M	K	K	L	K	H	D	K	L	V	Q	L	Y	A	V	V	S	E	E	P	.	.	.	.	.	.	.	.
Query Conservation																								.												.	.																																					.	.	.	.	.	.	.	.
Alig confidence														.										.												.	.																																					.	.	.	.	.	.	.	.
Template Conservation														.
Template Sequence		T	D	F	E	P	I	Q	C	M	G	R	G	.	F	G	V	V	F	E	A	K	N	K	V	D	D	C	N	Y	A	I	K	R	I	R	L	P	N	R	E	L	A	R	E	K	V	M	R	E	V	K	A	L	A	K	L	E	H	P	G	I	V	R	Y	F	N	A	W	L	E	T	P	P	E	K	W	Q	E	E	M
Template Known Secondary structure														.		S								T	T	T													S	T	T	T													T	S				T	T	B												S
Template Predicted Secondary structure														.
Template SS confidence
		587	.	.	590	.	.	.	.	.	.	.	.		.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.
								338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure		.	.	.	.	.	.																							.
Query SS confidence		.	.	.	.	.	.																							.
Query Sequence		.	.	.	.	.	.	I	Y	I	V	T	E	Y	M	N	K	G	S	L	L	D	F	L	K	D	G	E	G	.	R	A	L	K	L	P	N	L	V	D	M	A	A	Q	V	A	A	G	M	A	Y	I	E	R	M	N	Y	I	H	R	D	L	R	S	A	N	I	L	V	G	N	G	L	I	C	K	I	A	D	F	G
Query Conservation		.	.	.	.	.	.																							.
Alig confidence		.	.	.	.	.	.																							.
Template Conservation
Template Sequence		D	E	P	K	V	Y	L	Y	I	Q	M	Q	L	C	R	K	E	N	L	K	D	W	M	N	R	R	C	S	L	E	D	R	E	H	G	V	C	L	H	I	F	I	Q	I	A	E	A	V	E	F	L	H	S	K	G	L	M	H	R	D	L	K	P	S	N	I	F	F	T	M	D	D	V	V	K	V	G	D	F	G
Template Known Secondary structure																	S	S								T			S	G	G	G	S																						T	T								G	G	G					T	T									T
Template Predicted Secondary structure
Template SS confidence
		667	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	R	L	I	E	D	N	E	Y	T	A	R	Q	G	A	K	F	P	I	K	W	T	A	P	E	A	A	L	Y	G	R	F	T	I	K	S	D	V	W	S	F	G	I	L	L	T	E	L	V	T	K	G	R	V	P	Y	P	G	M	N	N	R	E	V	L	E	Q	V	E	R	G	Y	R	M	P	C	P	Q	D
Query Conservation
Alig confidence				.	.	.	.	.																																													.							.	.
Template Conservation				.	.	.	.	.																																													.							.	.
Template Sequence		L	V	.	.	.	.	.	T	A	M	D	Q	D	T	H	G	Q	V	T	K	L	Y	M	S	P	E	Q	I	H	G	N	N	Y	S	H	K	V	D	I	F	S	L	G	L	I	L	F	E	L	L	Y	.	S	F	S	T	Q	M	.	.	E	R	V	R	I	I	T	D	V	R	N	L	K	F	P	L	L	F	T	Q
Template Known Secondary structure		T		.	.	.	.	.				S									G	G	G	S												T																S	.							.	.											T	T
Template Predicted Secondary structure				.	.	.	.	.																																													.							.	.
Template SS confidence
		956	.						.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.		.	.	.	.	.	.			.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	I	S	L	H	E	L	M	I	H	C	W	K	K	D	P	E	E	R	P	T	F	E	Y	L	Q	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Y	P	Q	E	H	M	M	V	Q	D	M	L	S	P	S	P	T	E	R	P	E	A	T	D	I	I	E
Template Known Secondary structure																S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		1044	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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