Job Description P06241 Confidence 100.00% Date Sat Jun 16 10:36:34 BST 2012 Rank 211 Aligned Residues 255 % Identity 25% Template c3kmuA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:integrin-linked kinase; PDBTitle: crystal structure of the ilk/alpha-parvin core complex (apo) Resolution 1.80 Å

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		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310				.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.																											.	.	.
Query SS confidence																																																		.	.	.																											.	.	.
Query Sequence		V	W	E	I	P	R	E	S	L	Q	L	I	K	R	L	G	N	G	Q	F	G	E	V	W	M	G	T	W	N	G	N	T	K	V	A	I	K	T	L	K	P	G	T	M	S	P	E	S	.	.	.	F	L	E	E	A	Q	I	M	K	K	L	K	H	D	K	L	V	Q	L	Y	A	V	V	S	E	E	.	.	.
Query Conservation																																																		.	.	.																											.	.	.
Alig confidence																															.																			.	.	.																											.	.	.
Template Conservation																															.
Template Sequence		H	S	G	I	D	F	K	Q	L	N	F	L	T	K	L	N	E	N	H	S	G	E	L	W	K	G	R	W	Q	.	G	N	D	I	V	V	K	V	L	K	V	R	D	W	S	T	R	K	S	R	D	F	N	E	E	C	P	R	L	R	I	F	S	H	P	N	V	L	P	V	L	G	A	C	Q	S	P	P	A	P
Template Known Secondary structure							G	G	G											T	T									T	.	T											T	T													G	G	G	G				S		T	T										T	T	T	S	S
Template Predicted Secondary structure																															.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.			.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		P	I	Y	I	V	T	E	Y	M	N	K	G	S	L	L	D	F	L	K	D	G	E	G	R	A	L	K	L	P	N	L	V	D	M	A	A	Q	V	A	A	G	M	A	Y	I	E	R	M	N	.	.	Y	I	H	R	D	L	R	S	A	N	I	L	V	G	N	G	L	I	C	K	I	A	D	F	G	L	A	R	L
Query Conservation																																																			.	.
Alig confidence																																																			.	.
Template Conservation
Template Sequence		H	P	T	L	I	T	H	W	X	P	Y	G	S	L	Y	N	V	L	H	E	G	T	N	F	V	V	D	Q	S	Q	A	V	K	F	A	L	D	X	A	R	G	X	A	F	L	H	T	L	E	P	L	I	P	R	H	A	L	N	S	R	S	V	X	I	D	E	D	X	T	A	R	I	S	X	A	D	V	K	F	S
Template Known Secondary structure		S									T	T		B							S		S	S																							T	T	S	S	S			T	T				S	G	G	G					T	T	S						G	G	G	S			T
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.				.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480		.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure																														.	.	.																																							.
Query SS confidence																														.	.	.																																							.
Query Sequence		I	E	D	N	E	Y	T	A	R	Q	G	A	K	F	P	I	K	W	T	A	P	E	A	A	L	Y	G	R	.	.	.	F	T	I	K	S	D	V	W	S	F	G	I	L	L	T	E	L	V	T	K	G	R	V	P	Y	P	G	M	N	N	R	E	V	L	E	Q	V	E	.	R	G	Y	R	M	P	C	P	Q	D
Query Conservation																														.	.	.																																							.
Alig confidence												.	.	.	.	.	.													.	.	.																				.																			.
Template Conservation												.	.	.	.	.	.																																			.
Template Sequence		F	Q	S	P	G	R	X	Y	A	P	.	.	.	.	.	.	A	W	V	A	P	E	A	L	Q	K	K	P	E	D	T	N	R	R	S	A	D	X	W	S	F	A	V	L	L	W	E	L	V	T	.	R	E	V	P	F	A	D	L	S	N	X	E	I	G	X	K	V	A	L	E	G	L	R	P	T	I	P	P	G
Template Known Secondary structure		T	S		T	T			S		G	.	.	.	.	.	.	G	G	S							S		G	G	G	S																				.		S		T	T	T	T	S												S								T	T
Template Predicted Secondary structure												.	.	.	.	.	.																																			.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.							.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	I	S	L	H	E	L	M	I	H	C	W	K	K	D	P	E	E	R	P	T	F	E	Y	L	Q	S	F	L	E	D	Y	F	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	P	H	V	S	K	L	X	K	I	C	X	N	E	D	P	A	K	R	P	K	F	D	X	I	V	P	I	L	E	K	X	Q	D
Template Known Secondary structure														T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions