Return to main results Retrieve Phyre Job Id

Job DescriptionP06241
Confidence99.97%DateSat Jun 16 10:36:34 BST 2012
Rank279Aligned Residues184
% Identity21%Templatec3en9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:o-sialoglycoprotein endopeptidase/protein kinase; PDBTitle: structure of the methanococcus jannaschii kae1-bud32 fusion2 protein
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   274.....280.........290.........300.........310 .........320.........330..... ....340...
Predicted Secondary structure 

















.........







.

Query SS confidence 




































. . . . . . . . .
























.







Query Sequence  IKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES. . . . . . . . . FLEEAQIMKKLKHDKLVQLYAVVSE. EPIYIVTE
Query Conservation     

 
 

 
          



 
         .........   
   
  
 
 


   
    .    

 
Alig confidence 


















.
















.........
























.







Template Conservation        


  
  
   
.  



 
  
 

   

  

  
   
   
  
    
  
           



Template Sequence  VEVNWIGAEADIKRDSYLD. FDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS
Template Known Secondary structure  S






STT.


TTS
GGGTT




TTTT
Template Predicted Secondary structure 











.














Template SS confidence 















































































   319320.........330....... ..340.........350.........360.........370.........380.........390.......
 
   344.....350.........360.........370.........380.........390.........400.........410.........420...
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  YMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTAR
Query Conservation      
 
   
       
           
   
 


     
 

   
 
        
 



            
Alig confidence 













..........

































..



















Template Conservation   
 
  
   
   ..........      
   
  

  



 



 



   ..
 






      
  
 
Template Sequence  YINGKLAKDVIEDN. . . . . . . . . . LDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDKD. . LYIIDFGLGKISNLDEDKAV
Template Known Secondary structure 


SGGGTTTT
..........TT
S


GGGSSS..


TT



Template Predicted Secondary structure 





..........









..












Template SS confidence 















































































   415....420........ .430.........440.........450.........460.. .......470.........480..
 
   424.....430.........440.........450.........460.........470.........480.
Predicted Secondary structure 























Query SS confidence 

























































Query Sequence  QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER
Query Conservation            


           



 
  
 

 
 
  
       
    
  
Alig confidence 
......






























.



....










Template Conservation 
......
  
  

          
      

    .
   .... 
   
  
  
Template Sequence  D. . . . . . LIVFKKAVLSTHHEKFDEIWERFLEGYKSVY. DRWE. . . . IILELMKDVER
Template Known Secondary structure  ......
TTT
.TT....

Template Predicted Secondary structure  ......





.

....
Template SS confidence 

























































   483 ......490.........500.........510.... .... .520.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions