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Job DescriptionP06241
Confidence100.00%DateSat Jun 16 10:36:34 BST 2012
Rank142Aligned Residues238
% Identity27%Templatec2j2iB_
PDB info PDB header:transferaseChain: B: PDB Molecule:proto-oncogene serine/threonine-protein kinase pim-1; PDBTitle: crystal structure of the humab pim1 in complex with2 ly333531
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  ESLQLIKRLGNGQFGEVWMGTWNGNTK. VAIKTLKPGT. . . . . . . MSPESFLEEAQIMKKLK. . HDKLVQLYAVVSEE. P
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Template Sequence  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS
Template Known Secondary structure  TTTTTTGGG



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   36...40.........50.........60.........70.........80.........90.........100.........110.....
 
   338.340.........350.........360.........370.........380.........390.........400.. .......410......
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Query Sequence  IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGL. ICKIADFGLARLIE
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Template Sequence  FVLILERPEPVQDLFDFITERGA. LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK
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SGGGTTTT


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   116...120.........130........ .140.........150.........160.........170.........180.........190....
 
   417..420.........430.........440.. .......450.........460.........470.........480.........490.....
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Query Sequence  DNEYTARQGAKFPIKWTAPEAALYGR. FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISL
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Template Sequence  DTVYTDFDGTR. . . VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC. GDIPFEHDEE. . . . . . . IIGGQVFFRQRVSSEC
Template Known Secondary structure  SS
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   195....200..... ....210.........220.........230....... ..240....... ..250.........260...
 
   496...500.........510........
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Query Sequence  HELMIHCWKKDPEERPTFEYLQS
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Template Sequence  QHLIRWCLALRPSDRPTFEEIQN
Template Known Secondary structure  T
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   264.....270.........280......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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