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Job DescriptionP06241
Confidence100.00%DateSat Jun 16 10:36:34 BST 2012
Rank66Aligned Residues250
% Identity23%Templatec2bmcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:serine threonine-protein kinase 6; PDBTitle: aurora-2 t287d t288d complexed with pha-680632
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VWEIPRESLQLIKRLGNGQFGEVWMGTW. NGNTKVAIKTLKP. . . . GTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEE.
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Template Sequence  QWAL. . EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT
Template Known Secondary structure 


G..GG
SSTTT

TT
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   127..130 .........140.........150.........160.........170.........180.........190.........200....
 
   337..340.........350.........360.........370.........380.........390.........400.........410......
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Query Sequence  PIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIE
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Template Sequence  RVYLILEYAPLGTVYRELQKLSK. . FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS. . . .
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TT
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TTT




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S

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   205....210.........220....... ..230.........240.........250.........260.........270........
 
   417..420.........430.........440.........450.........460.........470.........480.........490......
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Query Sequence  DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLH
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Template Sequence  . . . . . . . . . . . VTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRVE. FTFPDFVTEGAR
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GGG

GGGTTTTSSGGG.SS
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   279280.........290.........300.........310.. .......320.........330... ......340.....
 
   497..500.........510.........520.........530.....
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Query Sequence  ELMIHCWKKDPEERPTFEYLQSFLEDYFTATEPQYQPGE
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Template Sequence  DLISRLLKHNPSQRPMLREVLEH. . PWITANSSKPSNCQ
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SSGGGS

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   358.360.........370.........380 .........390....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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