Job Description A0AVT1 Confidence 93.62% Date Tue Apr 3 14:58:27 BST 2012 Rank 96 Aligned Residues 140 % Identity 15% Template c4dioB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nad(p) transhydrogenase subunit alpha part 1; PDBTitle: the crystal structure of transhydrogenase from sinorhizobium meliloti Resolution 2.60 Å

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		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.													.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	D	I	V	E	S	L	G	K	P	E	C	E	E	F	L	P	R	G	D	R	Y	D	A	L	R	A	C	I	G	D	T	L	C	Q	.	.	.	.	.	.	.	.	.	.	.	.	K	L	Q	N	L	N	I	F	L	V	G	C	G	A	I	G	C	E	M	L	K	N	F	A	L	L	G	V	G	T	S	K
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		A	X	E	L	X	P	R	I	T	R	A	Q	S	X	D	V	L	S	S	Q	A	N	L	A	G	Y	Q	A	V	I	D	A	A	Y	E	Y	D	R	A	L	P	X	X	X	T	A	A	G	T	V	P	A	A	K	I	F	V	X	G	A	G	V	A	G	L	Q	A	I	A	T	A	R	R	L	G	A	.	.	.	.
Template Known Secondary structure			G	G	G					G	G	G	G	G	G																							S	S		S	S					T	T														S													T	T		.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		489	490	.	.	.	.	.	.	.	.	.																																	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	G	M	I	T	V	T	D	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	E	K	S	N	L	N	R	Q	F	L	F	R	P	H	H	I	Q	K	P	K	S	Y	T	A	A	D	A	T	L	K	I	N	S	Q	I
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	V	V	S	A	T	D	V	R	P	A	A	K	E	Q	V	A	S	L	G	A	K	F	I	A	A	A	L	V	A	E	H	I	A	K	Q	D	I	V	I	T	T	A	L	I	P	G	R	P	A	P	R	L	V	T	R	E	X	L	.	.	.	.	.	.	.	.	.	.	.	.	D	S	X	K	P	G	S
Template Known Secondary structure		.	.	.							S		T	T								T	T															T		S									T	T	S						B						.	.	.	.	.	.	.	.	.	.	.	.		T	S		T	T
Template Predicted Secondary structure		.	.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.													.	280	.	.	.	.	.
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	D	A	H	L	N	K	V	C	P	T	T	E	T	I	Y	N	D	E	F	Y	T	K	Q	D	V	I	I	T	A	L	D	N	V	E	A	R	R	Y	V	D	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	V	D	L	A	V	E	R	G	G	N	I	E	G	A	E	A	G	K	V	T	E	V	G	G	V	R	I	V	G	H	L	N	V	A	G	R	I	A	A	S	A
Template Known Secondary structure						T	T	G	G	G	T		S	B	T	T			T	T						T	T							S	S	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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