Job Description A0AVT1 Confidence 100.00% Date Tue Apr 3 14:58:27 BST 2012 Rank 15 Aligned Residues 165 % Identity 22% Template c3vh1A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:ubiquitin-like modifier-activating enzyme atg7; PDBTitle: crystal structure of saccharomyces cerevisiae atg7 (1-595) Resolution 3.00 Å

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		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Q	K	L	Q	N	L	N	I	F	L	V	G	C	G	A	I	G	C	E	M	L	K	N	F	A	L	L	G	V	G	T	S	K	E	K	G	M	I	T	V	T	D	P	D	L	I	E	K	S	N	L	N	R	Q	F	L	F	R	P	H	H	I	Q	K	P	K	S	Y	T	A	A	D	A	T	L	K	I	N	S
Query Conservation
Alig confidence																																	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.
Template Sequence		L	D	I	I	K	N	T	K	V	L	L	L	G	A	G	T	L	G	C	Y	V	S	R	A	L	I	A	W	G	V	R	.	.	.	.	.	.	K	I	T	F	V	D	N	G	T	V	S	Y	S	N	P	V	R	Q	A	L	Y	N	F	E	D	C	G	K	P	K	A	E	L	A	A	A	S	L	K	R	I	F	P
Template Known Secondary structure							T									S												T	T	T			.	.	.	.	.	.								S	B			T	T	S	T	T	T	S	T	T			S	T	T		S	S	B														T
Template Predicted Secondary structure																																	.	.	.	.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.							350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.												.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	I	K	I	D	A	H	L	N	K	V	C	P	T	T	E	T	I	Y	N	D	.	.	.	.	.	.	.	.	.	.	.	E	F	Y	T	K	Q	D	V	I	I	T	A	L	D	N	V	E	A	R	R	Y	V	D	S	R	C	L	A	N	L	R	P	L	L	D	S	G	T	M	G	T	K	G	H	T	E	V	I
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.																																						.								.
Template Conservation																																																																							.								.
Template Sequence		L	M	D	A	T	G	V	K	L	S	I	P	M	I	G	H	K	L	V	N	E	E	A	Q	H	K	D	F	D	R	L	R	A	L	I	K	E	H	D	I	I	F	L	L	V	D	S	R	E	S	R	W	L	P	S	L	L	S	N	I	E	N	K	T	V	I	N	A	A	.	L	G	F	D	S	Y	L	.	V	M
Template Known Secondary structure		T													S	S					S																			S							S	B	G	G	G	T										T	T								.			S	S				.
Template Predicted Secondary structure																																																																							.								.
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.		.	.	.	.	.	.	.		.	470
		604	.	.	.	.	.	610	.	.	.	.		.	.	.	.	.	620	.	.							.	.	.	.	.
Predicted Secondary structure													.									.	.	.	.	.	.
Query SS confidence													.									.	.	.	.	.	.
Query Sequence		V	P	H	L	T	E	S	Y	N	S	H	.	R	D	P	P	E	E	E	I	.	.	.	.	.	.	P	F	C	T	L
Query Conservation													.									.	.	.	.	.	.
Alig confidence													.									.	.	.	.	.	.
Template Conservation
Template Sequence		R	H	G	Q	L	G	C	Y	F	C	H	D	V	V	A	P	T	D	S	L	T	D	R	T	L	D	Q	M	C	T	V
Template Known Secondary structure						B			T	T	T	S		S	S		S	S	S		T	T	T	T	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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