Return to main results Retrieve Phyre Job Id

Job DescriptionA0AVT1
Confidence83.68%DateTue Apr 3 14:58:27 BST 2012
Rank341Aligned Residues30
% Identity17%Templatec3pvcA_
PDB info PDB header:oxidoreductase, transferaseChain: A: PDB Molecule:trna 5-methylaminomethyl-2-thiouridine biosynthesis PDBTitle: crystal structure of apo mnmc from yersinia pestis
Resolution2.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   461........470.........480.........490.......
Predicted Secondary structure 














Query SS confidence 




































Query Sequence  LNIFLVGCGAIGCEMLKNFALLGVGTSKEKGMITVTD
Query Conservation    











 





 
       
 
 
 
Alig confidence 























.......





Template Conservation   














  

 

 ....... 




Template Sequence  DDIAIIGGGIVSALTALALQRRGA. . . . . . . VVTLYC
Template Known Secondary structure  SS

STTT
.......
Template Predicted Secondary structure 






.......
Template SS confidence 




































   265....270.........280........ .290....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions