Return to main results Retrieve Phyre Job Id

Job DescriptionA0AVT1
Confidence94.14%DateTue Apr 3 14:58:27 BST 2012
Rank82Aligned Residues91
% Identity16%Templatec3n7uD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:formate dehydrogenase; PDBTitle: nad-dependent formate dehydrogenase from higher-plant arabidopsis2 thaliana in complex with nad and azide
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   458.460.........470.........480.........490.........500.........510.........520.........530.......
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  LQNLNIFLVGCGAIGCEMLKNFALLGVGTSKEKGMITVTDPDLIEKSNLNRQFLFRPHHIQKPKSYTAADATLKINSQIK
Query Conservation 
    











 





 
       
 
 
 
 



 









  



 

 

       

   
Alig confidence 


























.......






















............










Template Conservation 
 







 
 

  

  
 



....... 
   
                 ............ 

 


  

Template Sequence  LEGKTIGTVGAGRIGKLLLQRLKPFGC. . . . . . . NLLYHDRLQMAPELEKETGAKFV. . . . . . . . . . . . EDLNEMLPKCD
Template Known Secondary structure  STT


SGGG

.......
SS


T

............SSGGG
S
Template Predicted Secondary structure 









.......










............



Template SS confidence 















































































   189190.........200.........210..... ....220.........230........ .240.........
 
   538.540.........550.........560. ......
Predicted Secondary structure 
















...
Query SS confidence 























. . .





Query Sequence  IDAHLNKVCPTTETIYNDEFYTKQ. . . DVIITA
Query Conservation 
 
    
   

  
   
    ...


 

Alig confidence 























...





Template Conservation 

   



  
  

    
  

 

 


 
Template Sequence  VIVINMPLTEKTRGMFNKELIGKLKKGVLIVNN
Template Known Secondary structure 
S


TTTTT
B
TS
TT
Template Predicted Secondary structure 













Template SS confidence 
































   250.........260.........270.........280..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions