Job Description A0AVT1 Confidence 83.44% Date Tue Apr 3 14:58:27 BST 2012 Rank 350 Aligned Residues 155 % Identity 16% Template c3k6jA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein f01g10.3, confirmed by transcript evidence; PDBTitle: crystal structure of the dehydrogenase part of multifuctional enzyme 12 from c.elegans Resolution 2.20 Å

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		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	I	F	L	V	G	C	G	A	I	G	C	E	M	L	K	N	F	A	L	L	G	V	G	T	S	K	E	K	G	M	I	T	V	T	D	P	D	L	I	E	K	S	N	L	N	R	Q	F	L	F	R	P	H	H	I	Q	K	P	K	S	Y	T	A	A	D	A	T	L	K	I	N	S	Q	I	K	I	D	A
Query Conservation
Alig confidence																										.	.	.	.	.	.	.																																													.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.																																													.	.	.	.	.
Template Sequence		N	S	V	A	I	I	G	G	G	T	M	G	K	A	M	A	I	C	F	G	L	A	G	I	.	.	.	.	.	.	.	E	T	F	L	V	V	R	N	E	Q	R	C	K	Q	E	L	E	V	M	Y	A	R	E	K	S	F	K	R	L	N	D	K	R	I	E	K	I	N	A	N	L	K	I	T	.	.	.	.	.
Template Known Secondary structure										S													T	T		.	.	.	.	.	.	.							S																			T	T	S											T	T					.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.																																													.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.								.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.		.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.			.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
Predicted Secondary structure																													.																					.	.
Query SS confidence																													.																					.	.
Query Sequence		H	L	N	K	V	C	P	T	T	E	T	I	Y	N	D	E	F	Y	T	K	Q	D	V	I	I	T	A	.	L	D	N	V	E	A	R	R	Y	V	D	S	R	C	L	A	N	L	R	P	.	.	L	L	D	S	G	T	M	G	T	K	G	H	T	E	V	I	V	P	H	L	T	E	S	Y	N	S	H	R	D	P
Query Conservation																													.																					.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																.																					.	.											.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	D	F	H	K	L	S	N	C	D	L	I	V	E	S	V	I	E	D	M	K	L	K	K	E	L	F	A	N	L	E	N	I	C	K	S	T	C	I	F	G	T	N	T	S	S	L	D	.	.	.	.	.	.	.	.	.	L	N	E	I	S	S	V	L	R	D	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	S		G	G	G		T	T		S								S														T	T	S		T	T								S	S	S		.	.	.	.	.	.	.	.	.						T	T	S	S	S	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.
Template SS confidence
														108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.										.	.	.	.	160	.	.	.	.	.	.
												618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	P	E	E	E	I	P	F	C	T	L	K	S	F	P	A	A	I	E	H	T	I	Q	W	A	R	D	K	F	E	S	S
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	N	L	V	G	I	H	F	F	N	P	A	N	V	I	R	L	V	E	I	I	Y	G	S	H	T	S	S	Q	A	I	A	T	A	F	Q	A	C	E	S	I
Template Known Secondary structure		G	G								S	S	T	T	T										S	S																T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions