Job Description A0AVT1 Confidence 92.49% Date Tue Apr 3 14:58:27 BST 2012 Rank 140 Aligned Residues 117 % Identity 19% Template c2yv1A_ PDB info PDB header:ligase Chain: A: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; PDBTitle: crystal structure of succinyl-coa synthetase alpha chain from2 methanocaldococcus jannaschii dsm 2661 Resolution 1.70 Å

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		61	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		K	S	H	V	F	L	S	G	M	G	G	.	L	G	L	E	I	A	K	N	L	V	L	A	G	I	K	A	V	T	I	H	D	T	E	K	C	Q	A	W	D	L	G	T	N	F	F	L	S	E	D	D	V	V	N	K	R	N	R	A	E	A	V	L	K	H	I	A	E	L	N	P	Y	V	H	V	T	S	S	S
Query Conservation													.
Alig confidence													.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	T	K	A	I	V	Q	G	I	T	G	R	Q	G	S	F	H	T	K	K	M	L	E	C	G	T	K	I	V	G	G	V	T	P	G	K	G	G	Q	N	V	H	G	V	P	V	F	D	T	V	K	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	E	T	D	A	N	A	S	V	I	F	V	P
Template Known Secondary structure		T							T	T	T	S													T	T									T	T		T	T				T	T					S	S					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.														.	.	.	.	70	.	.	.	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		V	P	F	N	E	T	T	D	L	S	F	L	D	.	.	.	K	Y	Q	C	V	V	L	T	E	M	K	L	P	L	Q	K	K	I	N	D	F	C	R	S	Q	C	P	P	I	K	F	I	S	A	D	V	H	G	I	W
Query Conservation															.	.	.
Alig confidence															.	.	.																										.	.
Template Conservation																																											.	.
Template Sequence		A	P	F	A	K	D	A	V	F	E	A	I	D	A	G	I	E	L	I	V	V	I	T	E	H	I	P	V	H	D	T	M	E	F	V	N	Y	A	E	D	V	.	.	G	V	K	I	I	G	P	N	T	P	G	I	A
Template Known Secondary structure															T	T		S							S																		.	.	T						S	S
Template Predicted Secondary structure																																											.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions