Job Description A0AVT1 Confidence 94.92% Date Tue Apr 3 14:58:27 BST 2012 Rank 54 Aligned Residues 129 % Identity 17% Template c2qz9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: crystal structure of aspartate semialdehyde dehydrogenase2 ii from vibrio cholerae Resolution 2.20 Å

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		459	460	.	.	.	.	.	.	.	.		.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		Q	N	L	N	I	F	L	V	G	C	.	G	A	I	G	C	E	M	L	K	N	F	A	L	L	G	V	G	T	S	K	E	K	G	M	I	T	V	T	D	P	D	L	I	E	K	S	N	L	N	R	Q	F	L	F	R	P	H	H	I	Q	K	P	K	S	Y	T	A	A	D	A	T	L	K	I	N	S	Q	I	K
Query Conservation												.
Alig confidence												.																		.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	Q	F	N	V	A	I	F	G	A	T	G	A	V	G	E	T	M	L	E	V	L	Q	E	R	E	F	P	.	.	.	.	.	.	V	D	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	L	A	S	E	R	S	E	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Known Secondary structure										T	T	T	S													T	T			.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.						S	S	S	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.							.	.	.	.														.	.	.	.	40	.	.	.	.	.	.																		.
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.		610	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		I	D	A	H	L	N	K	V	C	P	T	T	E	T	I	Y	N	D	E	F	Y	T	K	Q	D	V	I	I	T	A	L	D	N	V	E	A	R	R	Y	V	D	S	R	C	L	A	N	L	R	P	L	L	D	S	G	T	M	G	T	K	G	H	T	E	V	I	V	P	H	L	T	E	.	S	Y	N	S	H	R	D
Query Conservation																																																																										.
Alig confidence														.	.	.																																																										.
Template Conservation														.	.	.
Template Sequence		Y	R	F	N	G	K	T	V	R	V	Q	N	.	.	.	V	E	E	F	D	W	S	Q	V	H	I	A	L	F	S	A	G	G	E	L	S	A	K	W	A	P	I	A	A	E	A	G	V	V	V	I	D	N	T	S	H	F	R	Y	D	Y	D	I	P	L	V	V	P	E	V	N	P	E	A	I	A	E	F	R	N
Template Known Secondary structure					T	T								.	.	.	G	G	G			G	G	G		S						S															T	T							S	S	T	T	T	T		T	T	S		B			T	T	T		G	G	G	G	G	G	G	G	T
Template Predicted Secondary structure														.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		617	.	.	620	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	E	E	E	I	P	F	C	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N	I	I	A	N	P	N	C	S
Template Known Secondary structure		T	S
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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