 |
| Job Description | A0AVT1 | | Confidence | 77.06% | Date | Tue Apr 3 14:58:27 BST 2012 |
| Rank | 494 | Aligned Residues | 77 |
| % Identity | 29% | Template | c2qm3A_ |
| PDB info |
PDB header:transferase | Chain: A: PDB Molecule:predicted methyltransferase; |
PDBTitle: crystal structure of a predicted methyltransferase from pyrococcus2 furiosus
|
| Resolution | 2.05 Å |
|
 |
|   |   |
458 | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | Q | N | L | N | I | F | L | V | G | C | G | A | I | G | C | E | M | L | K | N | F | A | L | L | G | V | G | T | S | K | E | K | G | M | I | T | V | T | D | P | D | L | I | E | K | S | N | L | N | R | Q | F | L | F | R | P | H | H | I | Q | K | P | K | S | Y | T | A | A | D | A | T | L | K | I | N | S | Q | I | K |
| Query Conservation |   |
|   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |
|
|   |
|
|   |   |   |   |   |   |   |
|
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . |
|
| Template Conservation |   |
|   |
|
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|   | . | . | . |   |
|   |   |   |   | . | . | . | . | . |   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |
|
|   | . |
|
| Template Sequence |   |
L | E | N | K | D | I | F | V | L | G | D | D | D | L | T | S | I | A | L | . |
. |
. |
X | L | S | G | L | P | . |
. |
. |
. |
. |
K | R | I | A | V | L | D | I | D | E | R | L | T | K | F | I | E | K | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | N | E | I | G | Y | E | . |
D |
| Template Known Secondary structure |   |
S | T | T |
|  |  |  |  |  | S |
| T | T |
|  |  |  |  |  | . | . | . |  |  |  | T |
|
| . | . | . | . | . | S |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  | T |
|
| . |
|
| Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . | . | . |  |  |  |
|
|
| . | . | . | . | . |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
| . |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | |
|
|
. | . | . | . | 170 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | |
. |
|   |
|   |   |
538 | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
I | D | A | H | L | N | K | V | C | P | T | T | E | T | I | Y | N | D | E | F | Y | T | K | Q | D | V | I | I | T |
| Query Conservation |   |
|   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|
|
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |   |   |
|
|
|   |
| . | . | . | . |
|
|   |   |   |   |   |   |
|
|   |
|   |
|
| Template Sequence |   |
I | E | I | F | T | F | D | L | R | K | P | . |
. |
. |
. |
L | P | D | Y | A | L | H | K | F | D | T | F | I | T |
| Template Known Secondary structure |   |
 |  |  |  |
|
|
| T | T | S |
| . | . | . | . |
|
| T | T | T | S | S |
| B | S |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
| . | . | . | . |
|
|  |  |  |  |
|
|
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
199 | 200 | . | . | . | . | . | . | . | . | . | |
|
|
|
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|