Job Description A0AVT1 Confidence 100.00% Date Tue Apr 3 14:58:27 BST 2012 Rank 10 Aligned Residues 216 % Identity 19% Template c2px9A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:sumo-activating enzyme subunit 2; PDBTitle: the intrinsic affinity between e2 and the cys domain of e12 in ubiquitin-like modifications Resolution UNK

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		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		P	E	E	E	I	P	F	C	T	L	K	S	F	P	A	A	I	E	H	T	I	Q	W	A	R	D	K	F	E	S	S	F	S	H	K	P	S	L	F	N	K	F	W	Q	T	Y	S	S	A	E	E	V	L	Q	K	I	Q	S	G	H	S	L	E	G	C	F	Q	V	I	K	L	L	S	R	R	P	R	N	W	.
Query Conservation																																																																																	.
Alig confidence																																																.																																	.
Template Conservation																																																.
Template Sequence		T	Q	R	T	F	P	G	C	T	I	R	N	T	P	S	E	P	I	H	C	I	V	W	A	K	Y	L	F	N	Q	L	F	G	E	E	D	A	D	Q	E	V	S	P	D	R	A	.	D	P	E	A	A	W	E	P	T	E	A	E	A	R	A	R	A	S	N	E	D	G	D	I	K	R	I	S	T	K	E	W	A
Template Known Secondary structure													S				S																	S				S	S	S			S			S	S	.		T	T	T	S					S	S			S	S	S		T	T	S			S	S	S
Template Predicted Secondary structure																																																.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		697	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	C	V	E	L	A	R	L	K	F	E	K	Y	F	N	H	K	A	L	Q	L	L	H	C	F	P	L	D	I	R	L	K	D	G	S	L	F	W	Q	S	P	K	R	P	P	S	P	I	K	F	D	L	N	E	P	L	H	L	S	F	L	Q	N	A	A	K	L	Y	A	T	V	Y	C	I	P	F	A	E	E
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.						.																																	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.						.																																	.	.	.	.	.	.	.
Template Sequence		K	S	T	G	Y	D	P	V	K	L	F	T	K	L	F	K	D	D	I	R	Y	L	L	T	M	.	.	.	.	.	.	.	.	.	.	D	K	L	W	R	.	K	R	K	P	P	V	P	L	D	W	A	E	V	Q	S	Q	G	E	E	T	N	A	S	D	Q	Q	N	E	P	Q	L	G	.	.	.	.	.	.	.
Template Known Secondary structure				T	T	S										T	T	T						T	T		.	.	.	.	.	.	.	.	.	.	G	G	G		S	.	S	S													T			S	S					S	S			S				S	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.						.																																	.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.											270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		777	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	S	A	D	A	L	L	N	I	L	S	E	V	K	I	Q	E	F	K	P	S	N	K	V	V	Q	T	D	E	T	A	R	K	P	D	H	V	P	I	S	S	E	D	E	R	N	A	I	F	Q	L	E	K	A	I	L	S	N	E	A	T	K	S	D	L	Q	M	A	V	L	S	F	E	K	D	D	D	H	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	D	Q	Q	V	L	D	V	K	S	Y	A	R	L	F	S	K	S	I	E	T	L	R	V	H	L	A	E	K	.	.	G	D	G	A	E	L	I	W	D	K	D	D	P	S	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	S																										.	.		T	T							S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Template SS confidence
																																			307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.			.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		857	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	I	D	F	I	T	A	A	S	N	L	R	A	K	M	Y	S	I	E	P	A	D	R	F	K	T	K	R	I	A	G	K
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	M	D	F	V	T	S	A	A	N	L	R	M	H	I	F	S	M	N	M	K	S	R	F	D	I	K	S	M	A	G	N
Template Known Secondary structure		.	.															T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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