Job Description A0AVT1 Confidence 89.79% Date Tue Apr 3 14:58:27 BST 2012 Rank 205 Aligned Residues 85 % Identity 21% Template c2hlpB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of the e267r mutant of a halophilic2 malate dehydrogenase in the apo form Resolution 2.59 Å

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		62	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																		.																																												.
Query SS confidence									.																		.																																												.
Query Sequence		S	H	V	F	L	S	G	.	M	G	G	L	G	L	E	I	A	K	N	L	V	L	A	G	I	.	K	A	V	T	I	H	D	T	E	K	C	Q	A	W	D	L	G	T	N	F	F	L	S	E	D	D	V	V	N	K	R	N	R	A	E	A	V	L	K	H	I	A	E	.	L	N	P	Y	V	H	V	T	S	S
Query Conservation									.																		.																																												.
Alig confidence									.																		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	K	V	S	V	V	G	A	A	G	T	V	G	A	A	A	G	Y	N	I	A	L	R	D	I	A	D	E	V	V	F	V	D	I	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	D	D	T	V	G	Q	A	A	D	T	N	H	G	I	A	Y	D	S	N	T	R	V	R
Template Known Secondary structure								T	T	T	S													T	T			S								G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G																T	T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160								.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																								.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.
Query Sequence		S	V	P	F	N	E	T	T	D	L	S	F	L	D	K	Y	Q	C	V	V	L	T	.	.	.	.	.	.	.	E	M	K	L	P	L	Q	K	K	I	N
Query Conservation																								.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.											.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.
Template Sequence		Q	G	G	Y	E	D	.	.	.	.	.	.	T	A	G	S	D	V	V	V	I	T	A	G	I	P	R	Q	P	G	Q	T	R	I	D	L	A	G	D	N
Template Known Secondary structure					G	G	G	.	.	.	.	.	.	G	T	T		S												T	T
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.							.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions