 |
| Job Description | A0AVT1 | | Confidence | 95.57% | Date | Tue Apr 3 14:58:27 BST 2012 |
| Rank | 37 | Aligned Residues | 76 |
| % Identity | 22% | Template | c2gcgB_ |
| PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:glyoxylate reductase/hydroxypyruvate reductase; |
PDBTitle: ternary crystal structure of human glyoxylate2 reductase/hydroxypyruvate reductase
|
| Resolution | 2.20 Å |
|
 |
|   |   |
458 | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | |
|
|
. | . | 500 | . | . | . | . | . | . | . | . | . | 510 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . |
|
|  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | Q | N | L | N | I | F | L | V | G | C | G | A | I | G | C | E | M | L | K | N | F | A | L | L | G | V | G | T | S | K | E | K | G | M | I | T | V | T | D | . |
. |
. |
P | D | L | I | E | K | S | N | L | N | R | Q | F | . |
. |
. |
. |
. |
L | F | R | P | H | H | I | Q | K | P | K | S | Y | T | A | A | D | A | T |
| Query Conservation |   |
|   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |
| . | . | . |   |
|
|
|
|   |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|   |   |
|
|
|
|   |
|
|   |
|
|   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
| Template Conservation |   |
|   |
|   |   |
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|   |
|
|
|   | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . |
| Template Sequence |   |
L | T | Q | S | T | V | G | I | I | G | L | G | R | I | G | Q | A | I | A | R | R | L | K | P | F | G | V | . |
. |
. |
. |
. |
. |
. |
Q | R | F | L | Y | T | G | R | Q | P | R | P | E | E | A | A | E | F | Q | A | E | F | V | S | T | P | E | L | A | A | Q | S | D | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
| Template Known Secondary structure |   |
| T | T |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  | G | G | G | T |
| . | . | . | . | . | . | . |
|  |  |  |  |  | S | S | S |
|
|  |  |  |  | G | G | G | T |
|  |  |
|
|  |  |  |  |  |  |  |
| S |  | . | . | . | . | . | . | . | . | . | . | . | . |
| Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |
530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . |
| Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | K | I | N | S | Q | I | K | I | D | A | H | L | N | K | V | C | P | T | T | E | T | I | Y | N | D | E | F | Y | T | K | Q |
| Query Conservation |   |
  |   |   |
|
|   |   |   |
|   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
| Alig confidence |   |
. | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
. | . | . | . | . | . | . | . | . |
|   |   |   |
|
|
|
|   |   |
|   |   |
|
|   |   |   |   |
|   |   |
|
| Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | V | V | A | C | S | L | T | P | A | T | E | G | L | C | N | K | D | F | F | Q | K | M |
| Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
| T | T | T | T | T |
| B | S |  |  |  |  |  |  | S |
| Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|
|
|
|
|
|
212 | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|