Job Description A0AVT1 Confidence 84.12% Date Tue Apr 3 14:58:27 BST 2012 Rank 328 Aligned Residues 160 % Identity 18% Template c2ep9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-gulonate 3-dehydrogenase; PDBTitle: crystal structure of the rabbit l-gulonate 3-dehydrogenase2 (nadh form) Resolution 1.85 Å

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		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		N	I	F	L	V	G	C	G	A	I	G	C	E	M	L	K	N	F	A	L	L	G	V	G	T	S	K	E	K	G	M	I	T	V	T	D	P	D	L	I	E	K	S	N	L	N	R	Q	F	L	F	R	P	H	H	I	Q	K	P	K	S	Y	T	A	A	D	A	T	L	K	I	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	L	I	V	G	S	G	L	V	G	R	S	W	A	M	L	F	A	S	G	G	F	.	.	.	.	.	.	.	R	V	K	L	Y	D	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	Q	I	T	G	A	L	E	N	I	R	K	E	M	K	S	L	Q	Q	S	G	S
Template Known Secondary structure									S													T	T		.	.	.	.	.	.	.							S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30								.	.	.	.	.	.	.	.																				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
			533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.		.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.				.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.
Predicted Secondary structure		.																																				.																					.	.	.
Query SS confidence		.																																				.																					.	.	.
Query Sequence		.	N	S	Q	I	K	I	D	A	H	L	N	K	V	C	P	T	T	E	T	I	Y	N	D	E	F	Y	T	K	Q	D	V	I	I	T	A	.	L	D	N	V	E	A	R	R	Y	V	D	S	R	C	L	A	N	L	R	P	.	.	.	L	L	D	S	G	T	M	G	T	K	G	H	T	E	V	I	V	P	H	L
Query Conservation		.																																				.																					.	.	.
Alig confidence		.																		.	.	.																.																					.	.	.
Template Conservation																				.	.	.
Template Sequence		L	K	G	S	L	S	A	E	E	Q	L	S	L	I	S	S	C	T	.	.	.	N	L	A	E	A	V	E	G	V	V	H	I	Q	E	C	V	P	E	N	L	D	L	K	R	K	I	F	A	Q	L	D	S	I	V	D	D	R	V	V	L	S	S	S	S	S	C	L	L	P	S	K	L	F	T	G	L	A	H	V
Template Known Secondary structure				S	S	S								T					S	.	.	.						T	T	T		S								S														T	T			S	S								S	S								T	T		T	T	G
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.				80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		608	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	S	Y	N	S	H	R	D	P	P	E	E	E	I	P	F	C	T	L	K	S	F	P	A	A	I	E	H	T	I	Q	W	A	R	D	K	F	E	S	S	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	C	I	V	A	H	P	V	N	P	P	Y	Y	I	P	L	V	E	L	V	P	H	P	E	T	S	P	A	T	V	D	R	T	H	A	L	M	R	K	I	G	Q
Template Known Secondary structure		G	G								S	S	T	T	T										T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions