Job Description A0AVT1 Confidence 88.25% Date Tue Apr 3 14:58:27 BST 2012 Rank 239 Aligned Residues 118 % Identity 17% Template c2aw5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadp-dependent malic enzyme; PDBTitle: crystal structure of a human malic enzyme Resolution 2.50 Å

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		442	.	.	.	.	.	.	.	450	.	.	.	.	.																			.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490					.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Query Sequence		R	Y	D	A	L	R	A	C	I	G	D	T	L	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	L	Q	N	L	N	I	F	L	V	G	C	G	A	I	G	C	E	M	L	K	N	F	A	L	L	G	V	G	T	S	K	E	K	.	.	.	.	G	M	I	T	V	T	D	P	D
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template Conservation
Template Sequence		K	Y	R	N	Q	Y	C	T	F	N	D	D	I	Q	G	T	A	S	V	A	V	A	G	L	L	A	A	L	R	I	T	K	N	K	L	S	D	Q	T	I	L	F	Q	G	A	G	E	A	A	L	G	I	A	H	L	I	V	M	A	L	E	K	E	G	L	P	K	E	K	A	I	K	K	I	W	L	V	D	S	K
Template Known Secondary structure				T	T	T	S	S				T	T	T																			T	S		G	G	G							B		S																		T								T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.		.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		L	I	E	K	S	N	L	N	R	Q	F	L	F	R	P	H	H	I	Q	K	P	K	S	Y	T	A	A	D	A	T	L	K	I	N	S	Q	I	K	I	D	A	H	.	L	N	K	V	C	P	T	T	E	T	I	Y	N	D	E	F	Y	T	K	Q	D	V	I	I	T	A	L	D	N	V	E	A	R	R	Y	V	D
Query Conservation																																												.
Alig confidence																						.	.	.	.																			.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	I	V	K	G	Q	E	K	E	K	F	A	H	E	H	E	E	M	K	.	.	.	.	N	L	E	A	I	V	Q	E	I	K	P	T	A	L	I	G	V	A	A	I	G	G	A	F	S	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	K
Template Known Secondary structure					B					G	G	G	G		B	S						.	.	.	.												S						S	S		T	T		S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.					.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.																											.	.	.
		579	580	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	C	L	A	N	L	R	P	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	M	A	A	F	N	E	R	P	I	I
Template Known Secondary structure								S	S
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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