Job Description A0AVT1 Confidence 93.28% Date Tue Apr 3 14:58:27 BST 2012 Rank 112 Aligned Residues 150 % Identity 13% Template c1zejA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:3-hydroxyacyl-coa dehydrogenase; PDBTitle: crystal structure of the 3-hydroxyacyl-coa dehydrogenase (hbd-9,2 af2017) from archaeoglobus fulgidus dsm 4304 at 2.00 a resolution Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	N	I	F	L	V	G	C	G	A	I	G	C	E	M	L	K	N	F	A	L	L	G	V	G	T	S	K	E	K	G	M	I	T	V	T	D	P	D	L	I	E	K	S	N	L	N	R	Q	F	L	F	R	P	H	H	I	Q	K	P	K	S	Y	T	A	A	D	A	T	L	K	I	N	S	Q	I	K	I	D
Query Conservation
Alig confidence																							.				.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.				.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	X	K	V	F	V	I	G	A	G	L	X	G	R	G	I	A	I	A	I	A	.	S	K	H	.	.	.	.	.	.	.	E	V	V	L	Q	D	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	A	L	E	A	A	R	E	Q	I	P	E	E	L	L	S	K	I	E	F	T	T	T	L	E
Template Known Secondary structure											S												.	T	T	S	.	.	.	.	.	.	.							S		.	.	.	.	.	.	.	.	.	.	.	.	.	.											S		G	G	G	G	G	G					S	S		T
Template Predicted Secondary structure																							.				.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.								.	.	.	.	.	.	30	.															.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.		.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.		.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
Predicted Secondary structure																														.																																.
Query SS confidence																														.																																.
Query Sequence		A	H	L	N	K	V	C	P	T	T	E	T	I	Y	N	D	E	F	Y	T	K	Q	D	V	I	I	T	A	.	L	D	N	V	E	A	R	R	Y	V	D	S	R	C	L	A	N	L	R	P	L	L	D	S	G	T	M	G	T	K	G	.	H	T	E	V	I	V	P	H	L	T	E	S	Y	N	S	H	R	D	P
Query Conservation																														.																																.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.																																.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	K	D	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	V	X	E	A	V	F	E	D	L	N	T	K	V	E	V	L	R	E	V	E	R	L	T	N	A	P	L	C	S	N	T	S	V	I	S	V	D	D	I	A	E	R	L	D	S	P	S	R	F	L	G	V	H	W	X	N
Template Known Secondary structure		T	G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S								S														T	T			S							S	S	S							T	T	S	S		G	G	G								S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.																		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	E	E	I	P	F	C	T	L	K	S	F	P	A	A	I	E	H	T	I	Q	W	A	R	D	K	F	E	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	P	H	V	X	P	L	V	E	I	V	I	S	R	F	T	D	S	K	T	V	A	F	V	E	G	F	L	R	E	L
Template Known Secondary structure		S	T	T	T										T	T																T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions