Job Description A0AVT1 Confidence 91.62% Date Tue Apr 3 14:58:27 BST 2012 Rank 165 Aligned Residues 106 % Identity 14% Template c1z7eC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:protein arna; PDBTitle: crystal structure of full length arna Resolution 3.00 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		K	M	A	K	S	H	V	F	L	S	G	M	G	G	.	L	G	L	E	I	A	K	N	L	V	L	A	G	I	K	A	V	T	I	H	D	T	E	K	C	Q	A	W	D	L	G	T	N	F	F	L	S	E	D	D	V	V	N	K	R	N	R	A	E	A	V	L	K	H	I	A	E	L	N	P	Y	V	H	V	T
Query Conservation																.
Alig confidence																.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	H	F	H
Template Known Secondary structure												T	T	T	S													S	S	S								S			T	T	T	G	G	G	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350																													.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160										.	.	.	.	.	.	.	.	.									170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure															.	.												.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Query SS confidence															.	.												.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Query Sequence		S	S	S	V	P	F	N	E	T	T	D	L	S	.	.	F	L	D	K	Y	Q	C	V	V	L	T	.	.	.	.	.	.	.	.	.	E	M	K	L	P	L	Q	K	K	.	.	.	.	.	.	.	.	I	N	D	F	C	R	S	Q	C	P	P	I	K	F	I	S	A	D	V	H	G	I	W	S
Query Conservation															.	.												.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Alig confidence															.	.												.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.									.	.
Template Conservation																																																														.	.
Template Sequence		F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	K	C	D	V	V	L	P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	.	.	R	K	R	I	I	F	P	S	T	S	E	V	Y	G
Template Known Secondary structure							T	T	T													S											T						S									T													T	.	.	T									G	G	G	G	B
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions